prot_L-elsbetiae_contig1575.4014.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1575.4014.1
Unique Nameprot_L-elsbetiae_contig1575.4014.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length207
Homology
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BLAST of mRNA_L-elsbetiae_contig1575.4014.1 vs. uniprot
Match: A0A6H5KJ77_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ77_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 7.310e-22
Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0 
Query:    2 PGTLVVGPCDAPRLGSLLVERAATALPRRSLGQVVRRARKLSTKPPPLPPRPGGKGHSRNGS--RGEVRTAAPTPASPKLGSD----ARNKGS----NNPFG 93
            P TLVVGPCDAPRLGSLLVERA+TA+PRRSLGQVVRRARKL++KPPPLPPRP  KG   NG    G     AP  A     SD    A  +G+    NNPFG
Sbjct:  620 PATLVVGPCDAPRLGSLLVERASTAIPRRSLGQVVRRARKLASKPPPLPPRPSAKGLGSNGGGRSGAAVVRAPPKAEGSWQSDPGKLAAKEGTGGSNNNPFG 721
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BLAST of mRNA_L-elsbetiae_contig1575.4014.1 vs. uniprot
Match: D8LJF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF1_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 4.660e-21
Identity = 64/109 (58.72%), Postives = 70/109 (64.22%), Query Frame = 0 
Query:    2 PGTLVVGPCDAPRLGSLLVERAATALPRRSLGQVVRRARKLSTKPPPLPPRPGGKGHSRNGS---------RGEVRTAAPTPASPKLGSD----ARNKGS----NNPFG 93
            P TLVVGPCDAPRLGSLLVERA TA+PRRSLGQVVR ARKL++KPPPLPPRP  +G   NG          RG    AAP  A     SD    A  +G+    NNPFG
Sbjct:  646 PATLVVGPCDAPRLGSLLVERALTAIPRRSLGQVVRSARKLASKPPPLPPRPSARGLGSNGXXXXXXXDVVRGTTAAAAPPKAEGSWQSDPGKLAAKEGTGGSNNNPFG 754
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1575.4014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ77_9PHAE7.310e-2262.75C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LJF1_ECTSI4.660e-2158.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1575contigL-elsbetiae_contig1575:17399..18312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1575.4014.1mRNA_L-elsbetiae_contig1575.4014.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1575 17397..18312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1575.4014.1 ID=prot_L-elsbetiae_contig1575.4014.1|Name=mRNA_L-elsbetiae_contig1575.4014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
VPGTLVVGPCDAPRLGSLLVERAATALPRRSLGQVVRRARKLSTKPPPLP
PRPGGKGHSRNGSRGEVRTAAPTPASPKLGSDARNKGSNNPFGSDGGAPA
PPSNPFESGASASSSKSPFGSGGAGGARGGGTPSALPLSPPPLPRRSGSP
FQSVESQHQHQHGALVASPRGRGRSEYSSSCSNTGGSGSAAAAALEGVLG
EAVGLLQ
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