prot_L-elsbetiae_contig1528.3746.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1528.3746.1
Unique Nameprot_L-elsbetiae_contig1528.3746.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length400
Homology
BLAST of mRNA_L-elsbetiae_contig1528.3746.1 vs. uniprot
Match: D8LNX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX1_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 5.860e-125
Identity = 254/424 (59.91%), Postives = 290/424 (68.40%), Query Frame = 0
Query:    1 MSATSQPPLLDSLDLQAGVCVKEGGDEKQGPAFEEDREHISQRELPSGRPLSKEPSLTPTLRAASIDGKILKVPARGGRSLEPQPGRRRPSHGDLLSPPATYPGRSASLGSGVGRDTHE---SPGRGSLVDRVKTLDPLSGATRLEPVSLGAGGGGG--RHRGRRLVVPGGTQPEGFGVEADDDAEDDPHWRLFKEGGSIGVVAAGGGLKPVPPPS-LPQKRRSRQRPGVLTKPELRRPRDRGTRLPIPTVARKHLPPPPVGETMGHGLSPSRDRGLGAPAAGLGSDAGGLSPPGSYLSNYDNN---------GR-GVA--------GRKRRGXXXXXXXDNARNTLPRRRGLGERGDGKEFPALPRQQRQQPCPSSPPVEGDGGVP--EEGVGGKGQRRASALRMGWVSSRRSQATLQELLRT 398
            MSAT+QPPL+D+LDLQAGVCV++GGDEKQGPAFEED +H  +R+L    PL +EPSL       SI G    V AR GRSL+P  GRR PSHGD LSPPAT+P RSAS+GSG GR       S  R S+V+RVKTLDPLSG  R+E    GA GGGG   HRGRRLVVPGG +PEGFGV +DDDAEDDPH RLFKEGG+IG                LP+KR S+QR GVL KPELRRPRDRGT+ PIPTV RKHLPPPP+GETMGHGLSP RDRGLG    G GSDAGG S PGSY + + N          GR G+A        GRKR+ XXXXXXX  + +  P R    E+G GKE PALP Q++QQ    S P EGDGG    E+G G K +RR S  RMGW+SSRRS+ TLQEL +T
Sbjct:  443 MSATTQPPLVDTLDLQAGVCVQQGGDEKQGPAFEEDHKHPPRRDLLPRGPLPREPSLARAPTPVSI-GDATSVSAREGRSLDPPRGRR-PSHGDPLSPPATHPLRSASIGSGSGRRARHHRVSSNRDSVVNRVKTLDPLSGGKRIEAGGTGARGGGGVGHHRGRRLVVPGGAEPEGFGVGSDDDAEDDPHLRLFKEGGNIGXXXXXXXXXXXXXXXXLPRKRGSKQRRGVLAKPELRRPRDRGTQPPIPTVTRKHLPPPPLGETMGHGLSPPRDRGLGETLGG-GSDAGGPSLPGSYAARHGNTNNSDSKFKRGREGLAAHPADSGVGRKRKSXXXXXXXXXSES--PHRMEGREKGGGKELPALPGQKKQQAFLPSSPGEGDGGDADGEDGGGRKARRRGSTSRMGWISSRRSKGTLQELFQT 861          
BLAST of mRNA_L-elsbetiae_contig1528.3746.1 vs. uniprot
Match: A0A6H5KSZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ6_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.440e-88
Identity = 208/437 (47.60%), Postives = 240/437 (54.92%), Query Frame = 0
Query:    3 ATSQPPLLDSLDLQAGVCVKEGGDEKQGPAFEEDREHISQRELPSGRPLSKEPSLTPTLRAASIDGKILKVPARGGRSLEPQPGRRRPSHGDLLSPPATYPGRSASLGSGVGRDTHESPGRGSLVDRVKTLDPLSGATRLEPVSLGAGGGGG--RHRGRRLVVPGGTQPEGFGV-------------------EADDDAEDDPHWRLFKEGGSIGVVAAGGGLKPVPPPSLPQKRRSRQRPGVLTKPELRRPRDRGTRLPIPTVARKHLPPPPVGETMGHGLSPSRDRGLGAPAAGLGSDAGGLSPPGSYLSNYDNN---------GR-GVA--------GRKRRGXXXXXXXDNARNTLPRRRGLGERGDGKEFPALPRQQRQQPCPSSPPVEGDGGVP--EEGVGGKGQRRASALRMGWVSSRRSQATLQELLRT 398
            A+++PPL+D+LDLQAGVCV++GGDEKQGPAFEED +H  +REL     L +EPSL       SI G    V AR GRSL+P                                      GR SLV+RVKTLDPL+G  R+E    GA GGGG   HRGRRLV PGGT+PEGFGV                                                 KPVPPP LP+KR S+QR GVL KPELRRPRDRGT+ PIPTV RKHLPPPP+GETMGHGLSP RDRGLG    G GSDAGG S PGSY   + N          GR GVA        GRKR+   XX    ++ +  P R    E G  KEFPALP Q++QQ    S P EG+GG    E+G G K +RR S  RMGW+SS RS+ TLQEL +T
Sbjct:  280 ASTKPPLVDTLDLQAGVCVQQGGDEKQGPAFEEDHKHPPRRELLQRGRLPREPSLAQAPTPVSI-GDATSVSAREGRSLDPP------------------------------------RGRDSLVNRVKTLDPLTGGKRIETGGTGARGGGGVGHHRGRRLVAPGGTEPEGFGVGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVPPPPLPRKRGSKQRRGVLAKPELRRPRDRGTQPPIPTVKRKHLPPPPLGETMGHGLSPPRDRGLGETLGG-GSDAGGPSSPGSYAVRHGNTNNSDSKFKRGREGVAAHPADSSVGRKRKSGGXXAVGGSSES--PHRMAGRESGGDKEFPALPGQKKQQAFLPSSPGEGEGGDAGGEDGGGRKARRRGSMSRMGWISSGRSKGTLQELFQT 676          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1528.3746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNX1_ECTSI5.860e-12559.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSZ6_9PHAE1.440e-8847.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1528contigL-elsbetiae_contig1528:17642..20518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1528.3746.1mRNA_L-elsbetiae_contig1528.3746.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1528 17642..23619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1528.3746.1 ID=prot_L-elsbetiae_contig1528.3746.1|Name=mRNA_L-elsbetiae_contig1528.3746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=400bp
MSATSQPPLLDSLDLQAGVCVKEGGDEKQGPAFEEDREHISQRELPSGRP
LSKEPSLTPTLRAASIDGKILKVPARGGRSLEPQPGRRRPSHGDLLSPPA
TYPGRSASLGSGVGRDTHESPGRGSLVDRVKTLDPLSGATRLEPVSLGAG
GGGGRHRGRRLVVPGGTQPEGFGVEADDDAEDDPHWRLFKEGGSIGVVAA
GGGLKPVPPPSLPQKRRSRQRPGVLTKPELRRPRDRGTRLPIPTVARKHL
PPPPVGETMGHGLSPSRDRGLGAPAAGLGSDAGGLSPPGSYLSNYDNNGR
GVAGRKRRGGDGGGGGDNARNTLPRRRGLGERGDGKEFPALPRQQRQQPC
PSSPPVEGDGGVPEEGVGGKGQRRASALRMGWVSSRRSQATLQELLRTT*
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