prot_L-elsbetiae_contig1526.3737.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1526.3737.1
Unique Nameprot_L-elsbetiae_contig1526.3737.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length138
Homology
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: A0A2J8A4F0_9CHLO (Transmembrane protein 218 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4F0_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 1.090e-14
Identity = 42/126 (33.33%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    4 AANIDGLTEKGE----TRVMGLGVGVFLIFFFSMVATVICLVGATTPRPGTFACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPM 125
            AA    LT  G     TRV+G+G+GVFL+FFF  ++ V+CLVG+ T            + G + L+L+ + +  + V+      + YD T  P ++  A++ +G+LLG VG+ V H+   ++A P+
Sbjct:   26 AAGGTELTHHGRALLATRVVGVGLGVFLVFFFLALSLVVCLVGSRTKYRWAIYMASTAMFGIIALVLIASPKGEKPVKPP----EGYDLTIIPVVIITAVVCIGVLLGAVGMLVFHVLPTVYARPL 147          
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: A0A6T5NUG8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NUG8_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 7.860e-13
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   10 LTEKGETRVMGLGVGVFLIFFFSMVATVICLVGATTPRPGTFACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPMYDQRSDPRR 134
            + E   TRV+G+G+GVFLI FF  +A ++ +VGA   + G F   G G+   V  +L  A++ S+YV  + + +Q+Y   FYPR+V  AIL  G L+      V  + + +H   M D  +  +R
Sbjct:   10 VVEAEPTRVLGVGIGVFLIAFFFALALLLSVVGAALGKKGIFFGIGTGIFLLVCAILFGADRGSQYVIVE-ETVQDYSALFYPRVVFAAILGAGALMAAAP-AVQMLTEQVHTEVMDDLETRRKR 132          
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: D8TRS0_VOLCA (Transmembrane protein 218 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRS0_VOLCA)

HSP 1 Score: 67.4 bits (163), Expect = 8.400e-12
Identity = 36/109 (33.03%), Postives = 63/109 (57.80%), Query Frame = 0
Query:   17 RVMGLGVGVFLIFFFSMVATVICLVGATTPRPGTFACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPM 125
            RV G+GVGVFL+FFF  ++ +ICL+G+ +          A + G V L+LL + +  +    ++   + YDQT  P +V + IL +G+L+  VG+ +  +   ++A P+
Sbjct:    4 RVAGVGVGVFLLFFFLALSVLICLLGSRSKLRWIVFTASAAMFGIVALVLLASPKGPK----RTKPPEGYDQTIVPLVVVMVILAIGVLMSAVGMLIFALLPTVYARPL 108          
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: A0A8J2SSJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSJ6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.590e-8
Identity = 38/138 (27.54%), Postives = 65/138 (47.10%), Query Frame = 0
Query:    4 AANIDGLTEKGETRVMGLGVGVFLIFFFSMVATVICLVGATTP--RPGTFACGGAGLLGF--VVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPMYDQRSDPRRPIF 137
            AA   GL   G+ RV+G+G+GVFL+ FF +    +C  GA  P  R   +     G LGF  V  +L +A++   Y  ++  + +E+D      +V   +L      G   +   H+  P+ A  +  + +  R+ +F
Sbjct:   36 AAEEQGLRRAGKERVLGVGLGVFLLSFFFIAMCALCWAGALLPQERGEQWIFNVVGTLGFGVVACVLFLADERPEYASEERAE-REHDDNLIGLIVVAGLLACAAAFGLGAVLCYHVCAPVEAPLVQKRPAGDRQGLF 172          
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: A0A8J4DC46_9CHLO (Transmembrane protein 218 n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DC46_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 4.830e-7
Identity = 30/109 (27.52%), Postives = 57/109 (52.29%), Query Frame = 0
Query:   17 RVMGLGVGVFLIFFFSMVATVICLVGATTPRPGTFACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPM 125
            RV G+GVG+F       ++ ++CL+G+ T            + G V ++LL + +  +  +      + YDQT  P ++ +A+L +G+LLG VG+ +  +    +A P+
Sbjct:   41 RVAGVGVGIFXXXXXXALSLLLCLLGSRTKIRWIIYAASTLMFGIVAIVLLASPKGQKSTKPP----EGYDQTVVPLIIIMAVLVVGVLLGAVGMLIFAVLPTTYARPL 145          
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Match: A0A8J4B9P7_9CHLO (Transmembrane protein 218 n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B9P7_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 9.900e-5
Identity = 30/109 (27.52%), Postives = 54/109 (49.54%), Query Frame = 0
Query:   17 RVMGLGVGVFLIFFFSMVATVICLVGATTPRPGTFACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAILTLGLLLGFVGLCVMHIGKPLHATPM 125
            RV G+GV  F       ++ ++CL+G+ T            + G V ++LL + +  +  +      + YD T  P ++ +AIL +G+LLG VG+ V  +    +A P+
Sbjct:   41 RVAGVGVXXFXXXXXXALSLLLCLLGSRTKIRWIIYAASTLMFGIVAVVLLASPKGQKSTKPP----EGYDLTIVPLIIIMAILVVGVLLGAVGMLVFAVLPATYARPL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1526.3737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2J8A4F0_9CHLO1.090e-1433.33Transmembrane protein 218 n=1 Tax=Tetrabaena socia... [more]
A0A6T5NUG8_HETAK7.860e-1335.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8TRS0_VOLCA8.400e-1233.03Transmembrane protein 218 n=1 Tax=Volvox carteri f... [more]
A0A8J2SSJ6_9STRA7.590e-827.54Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J4DC46_9CHLO4.830e-727.52Transmembrane protein 218 n=1 Tax=Volvox reticulif... [more]
A0A8J4B9P7_9CHLO9.900e-527.52Transmembrane protein 218 n=1 Tax=Volvox africanus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026771Transmembrane protein 218PANTHERPTHR31622FAMILY NOT NAMEDcoord: 16..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1526contigL-elsbetiae_contig1526:12190..14297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1526.3737.1mRNA_L-elsbetiae_contig1526.3737.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1526 12190..14297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1526.3737.1 ID=prot_L-elsbetiae_contig1526.3737.1|Name=mRNA_L-elsbetiae_contig1526.3737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MSTAANIDGLTEKGETRVMGLGVGVFLIFFFSMVATVICLVGATTPRPGT
FACGGAGLLGFVVLLLLVAEQDSRYVEDKSDQIQEYDQTFYPRLVAVAIL
TLGLLLGFVGLCVMHIGKPLHATPMYDQRSDPRRPIF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026771Tmem218