prot_L-elsbetiae_contig1526.3736.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1526.3736.1
Unique Nameprot_L-elsbetiae_contig1526.3736.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length884
Homology
BLAST of mRNA_L-elsbetiae_contig1526.3736.1 vs. uniprot
Match: A0A6H5KI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI22_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 4.530e-176
Identity = 347/558 (62.19%), Postives = 379/558 (67.92%), Query Frame = 0
Query:   12 GVAAEEVVDIRPVWMPLEDHGDAGTSVAEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTAVGFYSMERPDTKISMAYHPTNMTISLLPVISEDGRELRWDHQAASTSYVMDVDQAYWTAGSYMGETTGAFFSYAVEFSLDYHVRNPRYQPFSVYEDYPGRQFLTPSSCDEYVWALFSAAQTRGVRLAPVLLPPKHTIVIYSHSEPKIIVLNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVGEGGDQAGEXXEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWRRRQR---GRTLLWGSSLRGLLDEAAATPAPGVASAVPSGEDNASDPGDGGXXXXXXXXXXXXXXAGAEGVVTLQPTVSSTEASVAGAAPGETPAPEAALDDWQQVVAYYQSLQLCLQERKFSFVTSLKDFAQYFDCLDDVAFISIGPHEYYKVNLTSTKLDHISLPEELPEVPQRYEGFTWVDTAIAIWILMIMACGIHGLLWQAAVIQHWLKSHG 566
              A + +VDIRP W  L+D   +G +V  VFRSSEVLQMYHLQATA+LYEQGGLNHDMSFFLT V +YS+ERPD K+S+AYHPTNMTISLLPVISEDGRELRWDHQAAS SYVM V+QAYW AGSYMGETTGAFFSYAVEFSL+YH  +PRYQPFSVYEDYPGR+FLT S CDE+VWAL SAAQTRGVRL P LLP KH IVIYSHS+P+IIV +GD                          XXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXX          EG   +G XX   XXXXXXXXX                                  RQR   GRTLLWGS              PG  SA  +GE  A D   G                 AE       TVS  EA+V   AP   P      D+WQ+VV YYQSLQLCLQERKFSFVTSLKDF +YFDCLDDVAFI+IGPHEYYKVN+TSTKLDHISLPEELPEV +RYE FT VDTA+A+WILMI+ACGIHG+LWQAAVIQHWLKS+G
Sbjct:    9 SAAGDALVDIRPDWKSLDDA--SGATVGAVFRSSEVLQMYHLQATAELYEQGGLNHDMSFFLTGVAYYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVEQAYWNAGSYMGETTGAFFSYAVEFSLEYHRLHPRYQPFSVYEDYPGREFLTASGCDEFVWALLSAAQTRGVRLIPALLPQKHKIVIYSHSKPEIIVFSGDGSSASGGGNGDADEPVEGGAVPGEAGXXXXXXXXXXXXXXXXEVGXXXXXXXXXXXXXXXSDAAPVREEEEG-HASGXXXXXXXXXXXXXXXPSVDETRNNSSVSSSTGQEGQEEDGNGSSAGGEERQRLLRGRTLLWGS--------------PGSDSAGNAGEAGALDREAGEVEDEGTEEPGVTGVDEAEATGAPLSTVSPMEAAVQTRAPAAEPT-----DEWQEVVGYYQSLQLCLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTGVDTALAVWILMIIACGIHGVLWQAAVIQHWLKSYG 544          
BLAST of mRNA_L-elsbetiae_contig1526.3736.1 vs. uniprot
Match: D7FTM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM5_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 3.820e-144
Identity = 284/616 (46.10%), Postives = 319/616 (51.79%), Query Frame = 0
Query:   12 GVAAEEVVDIRPVWMPLEDHGDAGTSVAEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTAVGFYSMERPDTKISMAYHPTNMTISLLPVISEDGRELRWDHQAASTSYVMDVDQAYWTAGSYMGETTGAFFSYAVEFSLDYHVRNPRYQPFSVYEDYPGRQFLTPSSCDEYVWALFSAAQTRGVRLAPVLLPPKHTIVIYSHSEPKIIVLNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVGEGG---DQAGEXXEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWRRRQRGRTLLWGSSLRGLLDEAAATPAPGVASAVPSGEDNASDPGDGGXXXXXXXXXXXXXXAGAEGVVTLQPTVSSTEASVAGAAPGETPAPEAALDDWQQVVAYYQSLQLCLQERKFSFVTSLKDFAQYFDCLDDVAFISIGPHEYYKVNLTSTKLDHISLPEELPEVPQRYEGFTWVDTAIAIWILMIMACGIHGLLWQAAVIQHWLKSHGYGEQTEEVLPEEERDPPTLERHPSMTRQITTEYLRLGHIFLGKTED--YSVSPSSPRA 622
              A + +VDIRP W  L+D   +G +V EVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLT V FYS+ERPD K+S+AYHPTNMTISLLPVISEDGRELRWDHQAAS SYVM VDQAYW AGSYMGETTGAFFSYAVEFSL++H  +PRYQPFSVYEDYPG                                                                                                                         + GE G    +AGE  ++G                                                                 T  PGVAS                                AE       TVS TE +V   AP   P      D+WQ+VV YYQSLQLCLQERKFSFVTSLKDF +YFDCLDDVAFI+IGPHEYYKVN+TSTKLDHISLPEELPEV +RYE FT VDTA+A+WILMI+ACGIHG+LWQAAVIQHWLKS+G  +  EE L   + D    +R PS+TR+ITTEYLR+G + LGK ED    +SPSS  A
Sbjct:    9 SAAGDALVDIRPDWKSLDDA--SGATVGEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTGVAFYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVDQAYWNAGSYMGETTGAFFSYAVEFSLEHHRLHPRYQPFSVYEDYPG-------------------------------------------------------------------------------------------------------------------------SAGEAGALDQEAGEPEDEG-----------------------------------------------------------------TEVPGVASVDE-----------------------------AEATGAPLSTVSPTEMAVQTHAPAAEPT-----DEWQEVVGYYQSLQLCLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTQVDTALAVWILMIIACGIHGVLWQAAVIQHWLKSYGNAQVEEEPLDGSD-DSAEPQRPPSLTRKITTEYLRVGQLLLGKAEDDFLELSPSSAPA 401          
BLAST of mRNA_L-elsbetiae_contig1526.3736.1 vs. uniprot
Match: A0A835ZL91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL91_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.880e-52
Identity = 102/234 (43.59%), Postives = 142/234 (60.68%), Query Frame = 0
Query:   13 VAAEEVVDIRPVWMPLEDHGDAGTSVAEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTAVGFYSMERPDTKISMAYHPTNMTISLLPVISEDGRELRWDHQAASTSYVMDVDQA-----------------------YWTAGSYMGETTGAFFSYAVEFSLDYHVRNPRYQPFSVYEDYPGRQFLTPSSCDEYVWALFSAAQTRGVRLAPVLLPPKHTIVIYSHSEPKII 223
            VAA  V   RP W  L+D      ++++ F  +EV+QMYHL A   LYEQGGLNH ++F LTA+ F SME   +++ + Y P+NMTISL+P+IS+DG  + W H  AS  Y  D+D                         YW++ SY+  TTG+ FS AV+ +  YH  NP YQPFSVY+ YPGRQ +  SSCDE+VW L  AA ++GV++ P +LP K  I++Y+ ++P +I
Sbjct:   20 VAARNVT--RPTWQVLDD------TLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLI 245          
BLAST of mRNA_L-elsbetiae_contig1526.3736.1 vs. uniprot
Match: A0A7S2V1C8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 7.160e-25
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 0
Query:   94 PTNMTISLLPVISE--DGRE---LRWDHQAASTSYVMDVDQAYWTAGSYMGETTGAFFSYAVEFSLDYHVRNPRYQPFSVYEDYPGRQFLTPSSCDEYVWALFSAAQTRGVRLAPVLLPPKHTIVIYSHSEPKIIVLN 226
            P ++TIS+LP I E  DG +   L W H AAS  Y  D+D   W + +YMG   G+ F Y ++++LDY V++  YQPFSVY+ YPG  ++   SCDE+ W LF       + L PV++P K  I++YS  EP++  LN
Sbjct:    2 PVDLTISMLPEIQEKEDGSQDATLVW-HNAASIYYESDIDSTVWDSITYMGTMGGSTFRYLLDYALDYGVKHTFYQPFSVYDAYPGHLYIPAISCDEFTWKLFEKLANLQITLNPVVVPKKVKIILYSPCEPEVYALN 138          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1526.3736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KI22_9PHAE4.530e-17662.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTM5_ECTSI3.820e-14446.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZL91_9STRA2.880e-5243.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1C8_9STRA7.160e-2542.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026138Ceroid-lipofuscinosis neuronal protein 5PANTHERPTHR15380CEROID-LIPOFUSCINOSIS, NEURONAL 5coord: 34..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 529..553
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..528
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 554..883
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1526contigL-elsbetiae_contig1526:14705..21979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1526.3736.1mRNA_L-elsbetiae_contig1526.3736.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1526 9507..22945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1526.3736.1 ID=prot_L-elsbetiae_contig1526.3736.1|Name=mRNA_L-elsbetiae_contig1526.3736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=884bp
MIPLLLAETLWGVAAEEVVDIRPVWMPLEDHGDAGTSVAEVFRSSEVLQM
YHLQATAQLYEQGGLNHDMSFFLTAVGFYSMERPDTKISMAYHPTNMTIS
LLPVISEDGRELRWDHQAASTSYVMDVDQAYWTAGSYMGETTGAFFSYAV
EFSLDYHVRNPRYQPFSVYEDYPGRQFLTPSSCDEYVWALFSAAQTRGVR
LAPVLLPPKHTIVIYSHSEPKIIVLNGDGDGDGDGGGGDGRGDGGGGEND
NPAEEGGGSEGGEGDAGASSNSSGPGSTSLSAWSSSSLSSSADKAAVGEG
GDQAGEGGEKGDGGGGGGGGSGSGSTNSSSSVEEGQGGEGEPEGGGGEDR
RWRRRQRGRTLLWGSSLRGLLDEAAATPAPGVASAVPSGEDNASDPGDGG
SGEGDGEGGREAGTAGAEGVVTLQPTVSSTEASVAGAAPGETPAPEAALD
DWQQVVAYYQSLQLCLQERKFSFVTSLKDFAQYFDCLDDVAFISIGPHEY
YKVNLTSTKLDHISLPEELPEVPQRYEGFTWVDTAIAIWILMIMACGIHG
LLWQAAVIQHWLKSHGYGEQTEEVLPEEERDPPTLERHPSMTRQITTEYL
RLGHIFLGKTEDYSVSPSSPRAASSGAGAAGAAASAAATSGSLSPPGKEV
SSEASRHFGGRNGGGRPPQHPPPARGAQINGATKTEGGEKGRGAGMGNPR
RGRRVARREEGEEGVEMRATTKTRAVIAQEEGEKGGGVGPSSRSAGGGPG
RVGSPVERGNSLSPPRPMLSPPQRNRASGPYRGGVDGGGDRWIGFAGSPR
GERQTPERGRQSGGGGNVEGEELLGNSVASHTAASGSPRKRQHHGDDAAV
EFAAAPHGETWAGEESEAFLEEGLEEMLSGTSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026138CLN5