prot_L-elsbetiae_contig15220.3724.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15220.3724.1
Unique Nameprot_L-elsbetiae_contig15220.3724.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length196
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15220.3724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 74..122
e-value: 0.0029
score: 26.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 36..125
e-value: 7.8E-10
score: 40.6
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 75..122
e-value: 1.6E-7
score: 31.1
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 72..124
score: 9.33
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 75..121
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 75..122
score: 8.757
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 66..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15220contigL-elsbetiae_contig15220:494..2464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15220.3724.1mRNA_L-elsbetiae_contig15220.3724.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15220 494..3387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15220.3724.1 ID=prot_L-elsbetiae_contig15220.3724.1|Name=mRNA_L-elsbetiae_contig15220.3724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
RLKKTKLGGGRLCWIDPVTQTRSSERCGASTVGDGKAKARLADAVLKAKR
SGKHRFQKKKKREVSSARPERPRHCSVCKGSECDDTCLDCGKCSRVFHRD
CLASGTDTENGASGSWHCPVCTGAIRFFMLPADDRVVIQGLCSLSAPAEQ
RSGTSHRINKPGKARLSSASSSAAAGNLAAALGAALPTGRPKPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR001841Znf_RING
IPR011011Znf_FYVE_PHD