prot_L-elsbetiae_contig1521.3719.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1521.3719.1
Unique Nameprot_L-elsbetiae_contig1521.3719.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1274
Homology
BLAST of mRNA_L-elsbetiae_contig1521.3719.1 vs. uniprot
Match: A0A6H5K804_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K804_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 5.260e-125
Identity = 641/1381 (46.42%), Postives = 712/1381 (51.56%), Query Frame = 0
Query:   11 SSGCTTSKRAKLTSRSLSRLSDEP-VNGMGMMEAS----DIG-GMVGGG---ARRGPLVRSMSALDGQRS--KPVFEQSMSHSTEEWRAMSKAGRVLGVDSLEERDVEDQRRASSLKAARILGV--ENVAELQQSAAAAREERHKWAPPXXXXXXXXXXXXXKQPHDAEEKNKKEGRRGRKQTTKATGRRSRSL----------SAARGSKPRQGGITSLIRALEINGEGSEAGSTSQNGSSENGDCSSLEYNGSEDLPH-NKGRGGKQETGSNRSTRATESCSS--------------------------------------------------PELSDDSQLVGLQTPGHSSCSSSAAGPDGLRGFSRHTRDREDDMDIEPPPSQPRSAALTSLRKAPAPLLAPYTYMPSLAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVRQVARHASDFALSENGASWPSPSAGAVAEGKNGRPVTAPAAEEKGSG---RVSEALDDSPSFGASVTGNGGGDGDSFRQGGRLRDWSEASAAAVSASLAQQQH---------------RPSSAPFDSRPGGCSSXXXXXXXXXXXXXSGLRLPDPMPSSFSCSSWGATATDAAGCKEPRPENWSEYKQESPV-PALQLRGGQLPPPEVFDGAGAAXXXXXXACEEKWGG-WSNGLGSLQQHRPPAEFKHEPADVALLSTANGWEHQPA------------------------------------------------------------QLVGLVSSGAAGVHPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFSPHSGHQDREXHQHAASPARVTVSPVVN-----GGGSGXXGVPGYGFPLASVGGSESSGDSDSLCDTFPDRMDEGEGPAPSSAFEALAALIPVVNPIGIARQQIQHPVGRGXXXXXXXTPAAARHLVKVEELGVNGSVAXXXXXXXXXXXXXXXXXXXXXXXRRKPN--ATAPGVMPVAHSPVVSSGRGFAKA------GARKNSAXXXXXXXXXXXXXXSGVDXXXXXXXXXXX----ISTRKQQEVATRPREKGRFVKRAPAFLPISAFKPPSDRNEAAEAXXXXXXXRQKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIGRGEKGGGDSGVAPSSTVAGAKERAVQDQDSRDDASANPV-----KPGATSASTSTKPWTAXXXXXXXXXXXXXXXXXXXGRGERRMASPPPRTTGLPSNDSIWFGEDSLAAQGDGGGVGEGNFGGG----------------HA-RDPSVSSDGGSERGSERNSDGGGELRGMAFLPCSPMDRHSPGGIGGFS 1198
            SSGCT SKRAKLTSRSLSRL DEP VN  G++ +S    DIG G    G   AR G L     +LDG     +  FEQS SHSTEEWRAMSKA RVLGVDSLEERDVEDQRRASS+KAA+ILGV  ENVAELQQ+A AAR+ RH WAPP                                                        A RG    QG I+SLIRALEING G+  GSTSQ GSS+    SS+  N SEDL    KG G +QETGSNRSTRATESCSS                                                   ELSDDSQL GLQTPG +SCSS   GP GLRGFSRHTRD  DDMDIE PPSQPRSA + SLRKA APLLAPYT  PSL PA          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VARHASDFAL+E G  W SP   AVAEGKNG    +  + +KG G   RVSE LD+ P   +S  GNGG         G  RDWS A+   V+  +  QQH               R SSAP D +    ++                RLPDP+ S     +       AA CKE RPE W E+KQ SPV P L   G +LP P +   A AA        EEK GG WS G GS QQ    AE+K+E  D+A  ST  G   +                                                              Q VGLVSSG+AGV+PY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E FS +       X                       GGSG     GYG+PL +VGGS+SSG+SDS  DTF D+MDEG+GPA SSA+EALAA+IPVVNP+GI R Q      +          A  +  VK+E +   G  AXXXXXXXXXXXXXXXXXXXXXXX          P    V    V   G G  ++      G +                   GVD        XXX    ISTRKQ EVATRPREKGRFVKRAPAFLPISAFKPPSDR+EA  A  XXXXX     XXXXXXXXXXXXXX           XXXXXXXX       +GRG+K               AKE A         AS +PV                     XXXXXXXXXXXXXXXXXX GRG+RR++SPP R      ND IW  +DS +A GDGG   +                      HA RD SVSSD GSE+    +   GG+L+GMAFLP SPMDR+SPGG  G S
Sbjct:  104 SSGCT-SKRAKLTSRSLSRLGDEPAVNRSGVVGSSSGSIDIGHGSTSDGRARARDGFLKGRGMSLDGGGGGRRGHFEQSSSHSTEEWRAMSKAARVLGVDSLEERDVEDQRRASSVKAAQILGVGVENVAELQQNANAARD-RH-WAPPRSGASKAARMLGVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKATRG----QGTISSLIRALEING-GTATGSTSQTGSSDXX-XSSVGDNASEDLHQIKKGLGKQQETGSNRSTRATESCSSVSECAHTDTDGVSSVDGGSSARGSYDYSPVEGPQQQKQQQQHTRRASVSPAELSDDSQLAGLQTPG-ASCSSET-GPGGLRGFSRHTRD--DDMDIETPPSQPRSAPVASLRKASAPLLAPYT--PSLTPASSAGAAVTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------VARHASDFALNE-GFEWRSP-VSAVAEGKNG---ASSMSADKGGGHVARVSEILDEPPLVASS--GNGGQ--------GWARDWSAAADGTVA--ITAQQHXXXXXXXXXXXXXXXRSSSAPVDQQRTSRTASAMGPVD--------FRLPDPVSSWAEQRAAVGAVNTAADCKESRPEVWPEHKQVSPVVPQLGGGGRELPLPSMRASAAAA--------EEKMGGRWSGGQGS-QQRGSLAEYKYESPDLAQRSTVGGGVEEQQHXXXXXXXXXXXXXXXXXXXXXXQQRHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPVGLVSSGSAGVYPYPHPQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGFSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSGGSGDV-ASGYGYPLTTVGGSDSSGESDSAYDTFADQMDEGDGPAASSAYEALAAMIPVVNPMGIPRHQ------QAAGGPAATAAAEGQQHVKLEVIQGRGCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVPTKGDVWGENVSRLGGGDDRSSNVKGHGRKAGVVGGCGRGSKVPQGSGGGVDDVGRSTSAXXXXXXXISTRKQLEVATRPREKGRFVKRAPAFLPISAFKPPSDRSEADAAAEXXXXXXXXXXXXXXXXXXXXXXXXIQRGLNKAKASXXXXXXXXMMLPPAAVGRGDK---------------AKEHA---------ASWSPVIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGDRRLSSPPSRAA---PND-IWSEDDSGSAMGDGGSFSDAXXXXXXXXXXXXXXXXXXXXXHACRDASVSSDCGSEKXXXXS---GGDLKGMAFLPPSPMDRNSPGGGPGLS 1389          
BLAST of mRNA_L-elsbetiae_contig1521.3719.1 vs. uniprot
Match: D7G2Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y0_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 1.460e-120
Identity = 475/1029 (46.16%), Postives = 520/1029 (50.53%), Query Frame = 0
Query:   11 SSGCTTSKRAKLTSRSLSRLSDEP-VNGMGMMEASDIG-------------------------GMV---GGGARRGPLVRSMSALDGQRSKPVFEQSMSHSTEEWRAMSKAGRVLGVDSLEERDVEDQRRASSLKAARILGV--ENVAELQQSAAAAREERHKWAPPXXXXXXXXXXXXXKQPHDAEEKNKKEGRRGRKQTTKATGRRSRSL----------SAARGSKPRQGGITSLIRALEINGEGSEAGSTSQNGSSENGDCSSLEYNGSEDLPH-NKGRGGKQETGSNRSTRATESCSSPELSDDSQLVGLQTPGHSSCSSSAAGPDGLRGFSRHTRDREDDMDIEPPPSQPRSAALTSLRKAPAPLLAPYTYMPSLAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVRQVARHASDFALSENGASWPSPSAGAVAEGKNGRPVTAPAAEEKGSGRV---SEALDDSPSFGASVTGNGGGDGDSFRQGGRLRDWSEASAAAVSASLAQQQH---------RPSSAPFDSRPGGCSSXXXXXXXXXXXXXSGLRLPDPMPS-SFSCSSWGATATDAAGCKEPRPENWSEYKQESPVPALQLRGG-QLPPPEVFDGAGAAXXXXXXACEEKWGGWSNGLGSLQQHRPPAEFKHEPADVALLSTANGWEHQPAQLVGLVSSGAAGVHPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFSPHSGHQDREXHQHAASPARVTVSPVVNGGGSGXXGVPGYGFPLASVGGSESSGDSDSLCDTFPDRMDEGEGPAPSSAFEALAALIPVVNPIGIARQQIQHPVGRGXXXXXXXTPAAARHLVKVEELGVNGSVAXXXXXXXXXXXXXXXXXXXXXXXRRKPNATAPGVMPVAHSPVVSSGRGFAKAGARKNSAXXXXXXXXXXXXXX----SG------VDXXXXXXXXXXXISTRKQQEVATRPREKGRFVKRAPAFLPISAFKPPSDRNEAAEA 973
            SSGCT SKRAKLTSRSL+RL DEP VNG G+                                GM    GGG RRG                 FEQSMSHSTEEWRAMSKA RVLGVDSLEERDVEDQRRASS+KAA+ILGV  ENVAELQQ+A AAR+ RH WAPP                                                        A RG    QG I+SLIRALEING G+  GSTSQ GSS+NG  SS+  NGSEDL    KG G +QETGSNRSTRATESCSSPELSDDSQL GLQTPG SS  SS AGP GLRGFSRH RD  DDMDIE PPSQPRSA + SLRKA APLLAPYT  PSL PA         XXXXXXXXXXXXX             XXXXXXXX        VARHASDFAL+E G  W SP   AVAE KNG       + EKG GRV   SE LDDSP   +S  GNGG         G  RDWS  +AAA +A++    H         R SSAP D +    ++                RLPDP+PS +   +S GA  T AAGCKE RPE W E+KQ SPV    +RGG +LP P +   A AA        EEK GG S G G                DVA                                                                                                             GYG+PL +VGGS+SSG+SDS CDTFPD+MDEGEGPA SSA+EALAA+IPV+NP+GI R Q       G         AA +  VK+E   V     XXXXXXXXXXXXXXXXXXXXXXX        P    V    V   G G  ++ A K +                   SG        XXXXXXXXXXXIST KQ+EVATRPREKGRFVKRAPAFLPISAFKPPSDR+EA  A
Sbjct:  107 SSGCT-SKRAKLTSRSLTRLGDEPAVNGSGVGVVXXXXXXXXXXXXXXXXXXXXXXXXXXKGRGMSLDGGGGGRRGH----------------FEQSMSHSTEEWRAMSKAARVLGVDSLEERDVEDQRRASSVKAAQILGVGVENVAELQQNANAARD-RH-WAPPRSSASKAARMLGVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKATRG----QGTISSLIRALEING-GTATGSTSQTGSSDNG-SSSVGDNGSEDLHQIKKGLGKQQETGSNRSTRATESCSSPELSDDSQLAGLQTPGASS--SSEAGPGGLRGFSRHNRD--DDMDIETPPSQPRSAPVASLRKASAPLLAPYT--PSLTPASSAGAAVTAXXXXXXXXXXXXXGSPSIPTPQRQQHXXXXXXXX--------VARHASDFALNE-GVEWRSP-VSAVAERKNG---AGSMSAEKGGGRVARVSEVLDDSPLVASS--GNGGQ--------GWPRDWS--AAAAGTAAITAPHHPXXXXXXXXRSSSAPMDQQRASRTASAMGPVD--------FRLPDPVPSWAEQRASVGAVNT-AAGCKESRPEVWPEHKQVSPVVPQLVRGGRELPLPSMLASAAAA--------EEKMGG-SGGSG----------------DVAS------------------------------------------------------------------------------------------------------------GYGYPLTTVGGSDSSGESDSACDTFPDQMDEGEGPAASSAYEALAAMIPVINPMGIPRHQ------HGAGGPAATAAAAGQQHVKLE---VVQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVPTKGDVWGENVSRFGGGDDRSSALKGNGRKVGGVGGCGSGAKVPQGSGGXXXXXXXXXXXXXXXXXXISTPKQREVATRPREKGRFVKRAPAFLPISAFKPPSDRSEADAA 928          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1521.3719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K804_9PHAE5.260e-12546.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Y0_ECTSI1.460e-12046.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 967..997
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 208..870
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 857..1273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 834..856
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..833

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1521contigL-elsbetiae_contig1521:7509..14262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1521.3719.1mRNA_L-elsbetiae_contig1521.3719.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1521 7302..15664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1521.3719.1 ID=prot_L-elsbetiae_contig1521.3719.1|Name=mRNA_L-elsbetiae_contig1521.3719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1274bp
MGGGGGAYGLSSGCTTSKRAKLTSRSLSRLSDEPVNGMGMMEASDIGGMV
GGGARRGPLVRSMSALDGQRSKPVFEQSMSHSTEEWRAMSKAGRVLGVDS
LEERDVEDQRRASSLKAARILGVENVAELQQSAAAAREERHKWAPPRSSA
SKAARMLGVKQPHDAEEKNKKEGRRGRKQTTKATGRRSRSLSAARGSKPR
QGGITSLIRALEINGEGSEAGSTSQNGSSENGDCSSLEYNGSEDLPHNKG
RGGKQETGSNRSTRATESCSSPELSDDSQLVGLQTPGHSSCSSSAAGPDG
LRGFSRHTRDREDDMDIEPPPSQPRSAALTSLRKAPAPLLAPYTYMPSLA
PAPVAAAAAAAASPSPEACPAPSPSGSPSLQQQHQQQQQQQQQQQQQQQV
VRQVARHASDFALSENGASWPSPSAGAVAEGKNGRPVTAPAAEEKGSGRV
SEALDDSPSFGASVTGNGGGDGDSFRQGGRLRDWSEASAAAVSASLAQQQ
HRPSSAPFDSRPGGCSSSSSSGGGGGGGGGSGLRLPDPMPSSFSCSSWGA
TATDAAGCKEPRPENWSEYKQESPVPALQLRGGQLPPPEVFDGAGAAGAA
AAAACEEKWGGWSNGLGSLQQHRPPAEFKHEPADVALLSTANGWEHQPAQ
LVGLVSSGAAGVHPYPHPQFRHHQFQQQHQQWQQHQHQHQHQHQQHQQRA
MAVAESFSPHSGHQDRERHQHAASPARVTVSPVVNGGGSGGGGVPGYGFP
LASVGGSESSGDSDSLCDTFPDRMDEGEGPAPSSAFEALAALIPVVNPIG
IARQQIQHPVGRGRGGGAGATPAAARHLVKVEELGVNGSVAAAAAAAAVA
AAAAAARSKVPKPRRRKPNATAPGVMPVAHSPVVSSGRGFAKAGARKNSA
AAAAAPSAVSPSPASGVDDGAAGGGGSGGISTRKQQEVATRPREKGRFVK
RAPAFLPISAFKPPSDRNEAAEAAEAAEEARQKAEEAAAVAAAAAAAAAV
QQRRERAAAASSTSKVMPPPAAVTVIGRGEKGGGDSGVAPSSTVAGAKER
AVQDQDSRDDASANPVKPGATSASTSTKPWTAAAAAASRRAATGGGGGAT
RGRGERRMASPPPRTTGLPSNDSIWFGEDSLAAQGDGGGVGEGNFGGGHA
RDPSVSSDGGSERGSERNSDGGGELRGMAFLPCSPMDRHSPGGIGGFSGG
GGGGGGSSTVVRRGGGRTSMSMSPASSASSSAYSMCSPTGGDALLSAPLL
SDAPVPVVSGRGGGGIVRSSEKP*
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