prot_L-elsbetiae_contig15205.3716.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15205.3716.1
Unique Nameprot_L-elsbetiae_contig15205.3716.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length129
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig15205.3716.1 vs. uniprot
Match: A0A6H5JT94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT94_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.990e-31
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0 
Query:    1 MKCGKGGCNATANPADTMPITCSNKSTPHQHYRYDMIPTFFTVVPANSTHDCRPKTRDDVPVPSSTSTLTPALEEMLLCDAEECIHLDIEHQKMRSGYILDVKYVA 106
            MKCG  GCNATANP D +P TCSNK+  + H  YDM+ T FTV+P NS H C P + D +P+PS+ S  T  LE+  LCD EE ++LD + QK RSG+ +  KYVA
Sbjct:   88 MKCGHNGCNATANPTDALPTTCSNKTDRYVHNTYDMVRTLFTVIPMNSVHGCGPISPDGLPIPSTMSINTKVLEDAFLCDGEEYVNLDSDEQKNRSGWFIGTKYVA 193
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15205.3716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT94_9PHAE2.990e-3153.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15205contigL-elsbetiae_contig15205:2867..3583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15205.3716.1mRNA_L-elsbetiae_contig15205.3716.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15205 2867..3583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15205.3716.1 ID=prot_L-elsbetiae_contig15205.3716.1|Name=mRNA_L-elsbetiae_contig15205.3716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MKCGKGGCNATANPADTMPITCSNKSTPHQHYRYDMIPTFFTVVPANSTH
DCRPKTRDDVPVPSSTSTLTPALEEMLLCDAEECIHLDIEHQKMRSGYIL
DVKYVAGGRGEEALGHGPALGVLGRRPQR
back to top