prot_L-elsbetiae_contig1520.3710.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1520.3710.1
Unique Nameprot_L-elsbetiae_contig1520.3710.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A6H5K4A6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A6_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 6.800e-75
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSR 130
            VRFDSSRRRSSRILFLTEGLLLRQIASDP+LSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSR
Sbjct:  482 VRFDSSRRRSSRILFLTEGLLLRQIASDPNLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSR 611          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.810e-73
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSR 130
            VRFDSSRRRSSRILFLTEGLLLRQIASDP+LSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVS+HDGEGQRKLRSR
Sbjct:  447 VRFDSSRRRSSRILFLTEGLLLRQIASDPNLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSKHDGEGQRKLRSR 576          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A7S3UNY0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNY0_HETAK)

HSP 1 Score: 150 bits (378), Expect = 3.130e-44
Identity = 73/105 (69.52%), Postives = 86/105 (81.90%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVP 105
            +RFDSS+   +RILFLTEGLL+RQ+  D DLS Y VVIVDEVHERH  CDFLLGLL+AVL RR DLKVVLMSATIN EL+S +F G P++ VPGRM+ V+V Y+P
Sbjct:    6 IRFDSSKTHRTRILFLTEGLLVRQLLGDADLSQYDVVIVDEVHERHVSCDFLLGLLKAVLARRRDLKVVLMSATINTELYSDYFGGCPVVTVPGRMYAVKVEYLP 110          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A6B2G124_MYXSQ (Putative ATP-dependent RNA helicase DHX34 (Trinotate prediction) (Fragment) n=1 Tax=Myxobolus squamalis TaxID=59785 RepID=A0A6B2G124_MYXSQ)

HSP 1 Score: 145 bits (366), Expect = 8.750e-41
Identity = 68/112 (60.71%), Postives = 89/112 (79.46%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDI 112
            VRFD+++  +++ILFLTEGLLLRQ   DP LS+Y+V+IVDEVHERH   DFLLG+L+ +L +R DLK++LMSATIN  LFS +F  APLI+VPGR+HP+ + Y+P  A  DI
Sbjct:   25 VRFDTNKLANTKILFLTEGLLLRQFQVDPQLSAYNVIIVDEVHERHLNSDFLLGILKCLLNQRGDLKIILMSATINANLFSSYFGHAPLIQVPGRLHPIVLEYIPEFAKKDI 136          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A0C2MQC2_THEKT (Putative ATP-dependent RNA helicase DHX34 n=1 Tax=Thelohanellus kitauei TaxID=669202 RepID=A0A0C2MQC2_THEKT)

HSP 1 Score: 149 bits (376), Expect = 1.190e-40
Identity = 69/112 (61.61%), Postives = 89/112 (79.46%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDI 112
            VRFD+++   ++ILFLTEGLL+RQ   DP LS YSV+IVDEVHERH   DFLLG+L+ +L++R DLK++LMSATIN  LFS +FDGAPLI+VPGR+HP+ + Y+P     DI
Sbjct:  190 VRFDTNKMPETKILFLTEGLLMRQFQVDPQLSQYSVIIVDEVHERHLNSDFLLGVLKCLLKQRQDLKIILMSATINSSLFSSYFDGAPLIQVPGRLHPIVLEYIPDFVKKDI 301          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A6P8HPS4_ACTTE (probable ATP-dependent RNA helicase DHX34 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPS4_ACTTE)

HSP 1 Score: 151 bits (381), Expect = 1.110e-39
Identity = 70/111 (63.06%), Postives = 97/111 (87.39%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADND 111
            +RF++S+ +++RILFLTEGLLLRQ++SDPDLS Y+V+IVDEVHERH   DFLLG+LR ++  RADLK+VLMSATIN  LFS +F+GAP+I+VPGR++P++V+Y P +A+ +
Sbjct:  242 IRFEASKTKATRILFLTEGLLLRQLSSDPDLSQYNVLIVDEVHERHLHGDFLLGMLRCLIEGRADLKIVLMSATININLFSGYFEGAPVIQVPGRLYPIQVQYHPPSAEKE 352          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: UPI000A2A7184 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7184)

HSP 1 Score: 149 bits (376), Expect = 5.230e-39
Identity = 68/109 (62.39%), Postives = 95/109 (87.16%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAAD 109
            +RF++S+ +++RILFLTEGLLLRQ++SDPDLS Y+VV+VDEVHERH   DFLLG+LR ++  RADLKV+LMSATIN  LF+ +FDGAP+++VPGR++P++V+Y P + +
Sbjct:  240 IRFEASKTKATRILFLTEGLLLRQLSSDPDLSXYNVVVVDEVHERHLHGDFLLGMLRCLIEGRADLKVILMSATININLFAGYFDGAPVVQVPGRLYPIQVQYHPPSVE 348          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: C3Y3T9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y3T9_BRAFL)

HSP 1 Score: 144 bits (362), Expect = 2.900e-38
Identity = 66/105 (62.86%), Postives = 91/105 (86.67%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVP 105
            VRF+ S+  ++RILFLTEGLLLRQ+ +DP LS YS++++DEVHERH   DFLLG+LRA+LR R DLK+VLMSATIN +LF+ +F+GAP+I+VPGR++P+++ Y+P
Sbjct:  160 VRFEGSKTDATRILFLTEGLLLRQVTTDPTLSQYSIIVLDEVHERHLNGDFLLGVLRALLRAREDLKMVLMSATINIKLFAGYFNGAPVIQVPGRLYPIQLEYLP 264          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: UPI001F045D42 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F045D42)

HSP 1 Score: 146 bits (369), Expect = 4.580e-38
Identity = 70/118 (59.32%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSR 118
            +RF++S+ R ++ILFLTEGLLLRQ++SDP LS Y+++++DEVHERH   DFLLG+L+ ++R R+DLK++LMSATIN ELF+ +F GAP+I+VPGR+ P+EVRY P + D  I  V SR
Sbjct:  238 IRFETSKTRRTKILFLTEGLLLRQLSSDPSLSQYNIIVMDEVHERHIHGDFLLGVLKGLVRARSDLKLILMSATINIELFATYFSGAPVIQVPGRLFPIEVRYKPPSID--IATVQSR 353          
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Match: A0A2B4SMP0_STYPI (Putative ATP-dependent RNA helicase DHX34 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SMP0_STYPI)

HSP 1 Score: 146 bits (368), Expect = 6.250e-38
Identity = 70/105 (66.67%), Postives = 89/105 (84.76%), Query Frame = 0
Query:    1 VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVP 105
            +RF+SS+   +RILFLTEGLLLRQ+++DP LS YSV++VDEVHERH   DFLLG+LR +L  RADLK+VLMSATIN  LFS +F GAP+I++PGR++P+EVRY P
Sbjct:  254 IRFESSKTLGTRILFLTEGLLLRQLSTDPTLSQYSVIVVDEVHERHIHGDFLLGVLRGLLHARADLKLVLMSATINISLFSGYFTGAPVIQIPGRLYPIEVRYRP 358          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1520.3710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4A6_9PHAE6.800e-7598.46Helicase ATP-binding domain-containing protein n=1... [more]
D8LEZ4_ECTSI1.810e-7397.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UNY0_HETAK3.130e-4469.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6B2G124_MYXSQ8.750e-4160.71Putative ATP-dependent RNA helicase DHX34 (Trinota... [more]
A0A0C2MQC2_THEKT1.190e-4061.61Putative ATP-dependent RNA helicase DHX34 n=1 Tax=... [more]
A0A6P8HPS4_ACTTE1.110e-3963.06probable ATP-dependent RNA helicase DHX34 n=2 Tax=... [more]
UPI000A2A71845.230e-3962.39probable ATP-dependent RNA helicase DHX34 n=1 Tax=... [more]
C3Y3T9_BRAFL2.900e-3862.86Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
UPI001F045D424.580e-3859.32probable ATP-dependent RNA helicase DHX34 n=1 Tax=... [more]
A0A2B4SMP0_STYPI6.250e-3866.67Putative ATP-dependent RNA helicase DHX34 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..95
e-value: 1.9E-38
score: 133.9
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..109
NoneNo IPR availablePANTHERPTHR18934:SF148ATP-DEPENDENT RNA HELICASE DHX34-RELATEDcoord: 1..109
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 35..44
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..93
score: 13.144
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1520contigL-elsbetiae_contig1520:2033..5574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1520.3710.1mRNA_L-elsbetiae_contig1520.3710.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1520 2033..5575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1520.3710.1 ID=prot_L-elsbetiae_contig1520.3710.1|Name=mRNA_L-elsbetiae_contig1520.3710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
VRFDSSRRRSSRILFLTEGLLLRQIASDPDLSSYSVVIVDEVHERHAGCD
FLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVE
VRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGGGEGKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase