prot_L-elsbetiae_contig152.3708.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig152.3708.1
Unique Nameprot_L-elsbetiae_contig152.3708.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length534
Homology
BLAST of mRNA_L-elsbetiae_contig152.3708.1 vs. uniprot
Match: D7FLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC6_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 3.610e-125
Identity = 285/559 (50.98%), Postives = 344/559 (61.54%), Query Frame = 0
Query:    1 GGESSQGVTLEIQSVFEARRR--ALTAEVS-DHTLERRALSVVFAEDADEYDDVMAGVCASLLGVGKQNVISVSTDFGPDGPLEDAFGRGSMASSGSSQDEGATATQLTPITTCEVDLSGGSGESRAMSAAILVDRMLQPENFVLTVDENSFGPVNAVVSSVSFWQNECRDQTCPATGDGSFASVYPVSGDGAENQRSVAGDDGSGEEQRLFWFVVIAAGLLMAMVFSWCCFCVFCARSPKRERKPKLTIEDKYSVKSP--SKEGPATAVA-LSPPRRQQSAEPPSPTND--TPSGSLPGASPTTPPPRSRPRSHANGKRRTPPPPLSTSPGAGISAAGGNAAAGLAEPPSPGEADWRNKFGLGPLRDYTYRSAPVSPRRTPPSNSAGSTGLSSRGDPFCTTYRDNVVAAADG----KLRLPPLMDDASAAMESQSAWQTTDEMNASVQHTNDPVVRSSLGKAGMVIANALSSPRRELNRLKEALNRPSRDLHQSFASTSPTVAASS------------EGGFSPHVSLSTAGHGNSGHFNS-VSSTIYEIDLEADESG 534
            G ESS+G+TLEIQS+FEARRR  AL++EVS D + ERRALSVV+ EDA+ YD+ M  VCA ++GV ++ VISV T FGPDG  EDA  RG M SS SS DE   ATQLTP+TTCEVDLSG  G++R+M+AA +VDR++QPENFVL +DEN FGPVN VV+S                                                                              P + RK K    ++YSVKSP  +K+G    +A LSP R ++SA   SP  D  +PS   PG SP   PP++      +G++RTPPP LSTSPG G             EPPSPGEADWR+KFGLGPLRDYTYRSAP+SPRR+P S  + S    S G+PF T+Y+D+VVAAADG    K+ L PL DDASAAMESQ  W  +DE++ASVQH NDPVVRSSL KAG VIANA++SPR+ELNRLKEALNRPSR   Q+  STSPTV ASS            EGGFSP  + +  G  +SG+ N+  SS IYEIDLEADE+G
Sbjct:  708 GNESSRGITLEIQSIFEARRRRRALSSEVSHDGSSERRALSVVYEEDAEAYDETMVDVCAYMVGVDRERVISVWTSFGPDGAAEDAARRGLMTSS-SSSDEAIMATQLTPVTTCEVDLSG-EGDTRSMAAATMVDRLMQPENFVLAMDENQFGPVNVVVTS-----------------------------------------------------------------------------GPTKWRKSKPAESERYSVKSPPNTKDGGGAGLAVLSPQRYERSATATSPIPDGSSPSCLSPGRSPV--PPQAXXXPKHSGRKRTPPPRLSTSPGRGGDVP--------VEPPSPGEADWRHKFGLGPLRDYTYRSAPISPRRSPLSVGSAS---QSAGEPFYTSYQDHVVAAADGSMGGKVGLTPLADDASAAMESQVHWHVSDEVDASVQHNNDPVVRSSLAKAGTVIANAITSPRKELNRLKEALNRPSR--LQACHSTSPTVTASSADPSSMPGFFGSEGGFSPGGNNNAFGGSSSGNLNARASSPIYEIDLEADENG 1172          
BLAST of mRNA_L-elsbetiae_contig152.3708.1 vs. uniprot
Match: A0A6H5JEE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE7_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.370e-98
Identity = 228/434 (52.53%), Postives = 277/434 (63.82%), Query Frame = 0
Query:  125 MSAAILVDRMLQPENFVLTVDENSFGPVNAVVSSVSFWQNECRDQTCPATGDGSFASVYPVSGDGAENQRSVAGDDGSGE-EQRLFWFVVIAAGLLMAMVFSWCCFCVFCARSPKRERKPKLTIEDKYSVKSP--SKEGPATAVA-LSPPRRQQSAEPPSPTND--TPSGSLPGASPTTPPPRSRPRSHANGKRRTPPPPLSTSPGAGISAAGGNAAAGLAEPPSPGEADWRNKFGLGPLRDYTYRSAPVSPRRTPPSNSAGSTGLSSRGDPFCTTYRDNVVAAADG----KLRLPPLMDDASAAMESQSAWQTTDEMNASVQHTNDPVVRSSLGKAGMVIANALSSPRRELNRLKEALNRPSRDLHQSFASTSPTVAASS------------EGGFSPHVSLSTAGHGNSGH-FNS-VSSTIYEIDLEADESG 534
            M+AA +VDR++QPENFVL +DEN FGPVN VV+S     NECRDQTCPA GDGS+ASVYP++ +   +Q SV G+D + + E +L WF VIA  L +  V SWC  C+ C   P + RKPK    ++YSVKSP  +K+G    +A LSP   Q+SA   SP  D  +PS   PG SP             +G++RTPPP LSTSPG G             EPPSPGEADWR+KFGLGPLRD+TYRSAP+SPRR+P   S GS   S+ G PF T+Y+D+VVAAADG    K+ L PL DDASAAMESQ  W  +DE++ASVQH NDPVVRSSL KAG VIANA++SPR+  +                  STSPTV ASS            EGGFSP  + +T G  +S H FN+  SS IYEIDLEADE+G
Sbjct:    1 MAAATMVDRLMQPENFVLAMDENQFGPVNVVVTS-----NECRDQTCPA-GDGSYASVYPIA-ETPSSQSSVVGEDTTPDNELKLLWFAVIAGALFLLAVLSWCVVCLCCG-GPTKWRKPKPAESERYSVKSPPNTKDGGGAGLAVLSPQGNQRSATATSPIPDGSSPSCMSPGRSPVX--XXXXXXXXHSGRKRTPPPRLSTSPGRGRDVP--------VEPPSPGEADWRHKFGLGPLRDHTYRSAPISPRRSP--LSVGSASRSA-GGPFYTSYQDHVVAAADGNMGGKVGLTPLADDASAAMESQVHWHVSDEVDASVQHNNDPVVRSSLAKAGTVIANAITSPRKACH------------------STSPTVTASSADPSSMPGFFGSEGGFSPGGNNNTFGGSSSSHNFNARASSPIYEIDLEADENG 395          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig152.3708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLC6_ECTSI3.610e-12550.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE7_9PHAE1.370e-9852.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..534
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..207
NoneNo IPR availableTMHMMTMhelixcoord: 210..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig152contigL-elsbetiae_contig152:14417..23074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig152.3708.1mRNA_L-elsbetiae_contig152.3708.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig152 14415..23074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig152.3708.1 ID=prot_L-elsbetiae_contig152.3708.1|Name=mRNA_L-elsbetiae_contig152.3708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
GGESSQGVTLEIQSVFEARRRALTAEVSDHTLERRALSVVFAEDADEYDD
VMAGVCASLLGVGKQNVISVSTDFGPDGPLEDAFGRGSMASSGSSQDEGA
TATQLTPITTCEVDLSGGSGESRAMSAAILVDRMLQPENFVLTVDENSFG
PVNAVVSSVSFWQNECRDQTCPATGDGSFASVYPVSGDGAENQRSVAGDD
GSGEEQRLFWFVVIAAGLLMAMVFSWCCFCVFCARSPKRERKPKLTIEDK
YSVKSPSKEGPATAVALSPPRRQQSAEPPSPTNDTPSGSLPGASPTTPPP
RSRPRSHANGKRRTPPPPLSTSPGAGISAAGGNAAAGLAEPPSPGEADWR
NKFGLGPLRDYTYRSAPVSPRRTPPSNSAGSTGLSSRGDPFCTTYRDNVV
AAADGKLRLPPLMDDASAAMESQSAWQTTDEMNASVQHTNDPVVRSSLGK
AGMVIANALSSPRRELNRLKEALNRPSRDLHQSFASTSPTVAASSEGGFS
PHVSLSTAGHGNSGHFNSVSSTIYEIDLEADESG
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