prot_L-elsbetiae_contig152.3705.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig152.3705.1
Unique Nameprot_L-elsbetiae_contig152.3705.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length154
Homology
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BLAST of mRNA_L-elsbetiae_contig152.3705.1 vs. uniprot
Match: A0A6H5JEE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.780e-20
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 0 
Query:    1 MNLQSPGPGSPKAFDPDATPMPGMPVKPPSPTHSAVS-AMKTPSTMTNPCRISDASPMYDRAAIARAMSQAAEEADIDGENDMVLPAGAWPSERRMNSYNGSS-SVISDMTS 110
            MNLQSPGP SPKA   + T MP +P+ PPSP+    S  ++TP T  NP  ISDASPMYDR AIARAM+QA +E D  G++D+V+    WPSERR+NSY  SS S +S+MTS
Sbjct: 1196 MNLQSPGPDSPKALQ-EVT-MPALPM-PPSPSMPKASMTLQTPKTAVNPRHISDASPMYDREAIARAMAQADQEQD--GDSDIVVSRVEWPSERRINSYTDSSVSGMSEMTS 1302
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BLAST of mRNA_L-elsbetiae_contig152.3705.1 vs. uniprot
Match: D7FLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC6_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 5.490e-19
Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 0 
Query:    1 MNLQSPGPGSPKAFDPDATPMPGMPVKPPSPTHSAVSAMKTPSTMTNPCRISDASPMYDRAAIARAMSQAAEEADIDGENDMVLPAGAWPSERRMNSYNGSS-SVISDMTS 110
            MNLQSPGP SP+A      PMP +P+        A   ++TP T  N   ISDASPMYDR  IARAM+QA EE D  G++D+V+    WPSERR+NSY  SS S +S+MTS
Sbjct: 1817 MNLQSPGPDSPRALQ--GVPMPALPMPXXXXXXKAPMTLQTPKTAVNSRHISDASPMYDRETIARAMAQADEEQD--GDSDIVVSRVEWPSERRINSYTDSSVSGMSEMTS 1923
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig152.3705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEE7_9PHAE1.780e-2058.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLC6_ECTSI5.490e-1953.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig152contigL-elsbetiae_contig152:9656..10868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig152.3705.1mRNA_L-elsbetiae_contig152.3705.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig152 9536..12149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig152.3705.1 ID=prot_L-elsbetiae_contig152.3705.1|Name=mRNA_L-elsbetiae_contig152.3705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MNLQSPGPGSPKAFDPDATPMPGMPVKPPSPTHSAVSAMKTPSTMTNPCR
ISDASPMYDRAAIARAMSQAAEEADIDGENDMVLPAGAWPSERRMNSYNG
SSSVISDMTSSSGGSGVGTSSGSSSSSGGGGGGSGGSSNGHCSSGSDASD
RKF*
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