prot_L-elsbetiae_contig1515.3684.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1515.3684.1
Unique Nameprot_L-elsbetiae_contig1515.3684.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length296
Homology
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BLAST of mRNA_L-elsbetiae_contig1515.3684.1 vs. uniprot
Match: D8LU64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU64_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 6.300e-10
Identity = 43/91 (47.25%), Postives = 48/91 (52.75%), Query Frame = 0 
Query:  208 SSLARLMRQGGAGKREAPGFDAAVTASANEGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNSS---DGGAAHEDLSAWLHSTDDWWTS 295
            +S +RLM+QGG   +EAPGFDAAV ASA    G                            DD+     DGGAAHEDLSAWLHST DWWTS
Sbjct:   54 ASFSRLMQQGGG--KEAPGFDAAVRASAASSDGNTGGVEVAAVADAVDAG-----------DDDKXXXXDGGAAHEDLSAWLHSTHDWWTS 131
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BLAST of mRNA_L-elsbetiae_contig1515.3684.1 vs. uniprot
Match: A0A6H5KGC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC1_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 4.430e-6
Identity = 51/82 (62.20%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:  214 MRQGGAGKREAPGFDAAVTASANEGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNSSDGGAAHEDLSAWLHSTDDWWTS 295
            M++GG   ++APGFDAAV ASA    G   XXXXXXXXX        XXXXXXX      D GAAHEDLSAWLHST DWWTS
Sbjct:    1 MQEGGG--KKAPGFDAAVRASAASSDGNARXXXXXXXXXPDAIDVGDXXXXXXX------DEGAAHEDLSAWLHSTHDWWTS 74
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1515.3684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU64_ECTSI6.300e-1047.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGC1_9PHAE4.430e-662.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1515contigL-elsbetiae_contig1515:4441..6100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1515.3684.1mRNA_L-elsbetiae_contig1515.3684.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1515 4441..6377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1515.3684.1 ID=prot_L-elsbetiae_contig1515.3684.1|Name=mRNA_L-elsbetiae_contig1515.3684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp
MDTLTDGVGSLGVASPEATSNGDPPEPGGGAPRRRGHVSRRETLTGSTHG
AFLPEPARPALAIGGVGRAYPRAACASAGAQSCAMMRRQKAQSGTETGGP
GQHQSKRHRNGSLAAGASLSFRNVVKPSVLPVEDDVAGVSATPSAGAAAA
AAPAAPAPRARSHPAPRTGAAGGCGAMDVEITEGQERCCPCSSTMPPPST
PHLPRTASSLARLMRQGGAGKREAPGFDAAVTASANEGKGGATAAAAAAA
AAAAAAGAEGGPDPDEDLDDNSSDGGAAHEDLSAWLHSTDDWWTS*
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