prot_L-elsbetiae_contig15137.3677.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15137.3677.1
Unique Nameprot_L-elsbetiae_contig15137.3677.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
BLAST of mRNA_L-elsbetiae_contig15137.3677.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.230e-30
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0
Query:    1 GEALGATSASDPGAATAKARVWMLRALRDGIRTSQDLELAAGKRALPLLLAMADSPAGGGDAALQGLIFDVLCKVAALERSGAR 84
            G+ LGATSASDPGAA+ KARVWMLRALRDG+ TS+DLELAAGKRA+PLLLAMADSP G GDA +Q LI D+L +VA+LERSGAR
Sbjct: 2709 GDTLGATSASDPGAASNKARVWMLRALRDGLHTSEDLELAAGKRAVPLLLAMADSPVGNGDAVIQELIVDILGRVASLERSGAR 2792          
BLAST of mRNA_L-elsbetiae_contig15137.3677.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 5.810e-28
Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 GEALGATSASDPGAATAKARVWMLRALRDGIRTSQDLELAAGKRALPLLLAMADSPAGGGDAALQGLIFDVLCKVAALERSGAR 84
            G+ LGATSASDPGAA+ KARVWMLRALRDG+RTS+DLELAAGKRA+PLLLAMADSP G GD  +Q LI D+L +VA+LE  G +
Sbjct: 2079 GDTLGATSASDPGAASNKARVWMLRALRDGLRTSEDLELAAGKRAVPLLLAMADSPVGNGDVVIQELIVDILGRVASLEALGVK 2162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15137.3677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K182_9PHAE2.230e-3078.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8A9_ECTSI5.810e-2873.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032436Nucleolar pre-ribosomal-associated protein 1, C-terminal domainPFAMPF16201NopRA1coord: 10..95
e-value: 7.2E-14
score: 51.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15137contigL-elsbetiae_contig15137:1400..2992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15137.3677.1mRNA_L-elsbetiae_contig15137.3677.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15137 1400..2994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15137.3677.1 ID=prot_L-elsbetiae_contig15137.3677.1|Name=mRNA_L-elsbetiae_contig15137.3677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
GEALGATSASDPGAATAKARVWMLRALRDGIRTSQDLELAAGKRALPLLL
AMADSPAGGGDAALQGLIFDVLCKVAALERSGARYLLNSIGLVAWARVVL
GRSLLVNAPAAPAGKRKAGTVGGGGGGVGGAKRHRAGPGTGETLPADLQA
QMLSLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032436NopRA1_C