prot_L-elsbetiae_contig15131.3673.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15131.3673.1
Unique Nameprot_L-elsbetiae_contig15131.3673.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length200
Homology
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BLAST of mRNA_L-elsbetiae_contig15131.3673.1 vs. uniprot
Match: D8LJI6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI6_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.600e-8
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0 
Query:  130 HPSFGYTSDMKARRCARHRLENMEGVKGHQRQK 162
            HPSFGY SD KARRCARHRLENMEGVKGH++++
Sbjct:  625 HPSFGYASDKKARRCARHRLENMEGVKGHRQKR 657
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BLAST of mRNA_L-elsbetiae_contig15131.3673.1 vs. uniprot
Match: A0A6H5JGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG2_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.900e-5
Identity = 18/39 (46.15%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    9 CNDDQCTRQPSFGTEGDRRASYCAEHKKAGMINVLARRC 47
            C +D CT +PS+G  G ++A +C++HKK GM+N++++RC
Sbjct:   27 CQEDGCTTRPSYGNAGCKKAEFCSQHKKPGMMNLVSKRC 65
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15131.3673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJI6_ECTSI2.600e-881.82EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JGG2_9PHAE2.900e-546.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15131contigL-elsbetiae_contig15131:1033..3286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15131.3673.1mRNA_L-elsbetiae_contig15131.3673.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15131 1021..3286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15131.3673.1 ID=prot_L-elsbetiae_contig15131.3673.1|Name=mRNA_L-elsbetiae_contig15131.3673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp
MVDTRHPLCNDDQCTRQPSFGTEGDRRASYCAEHKKAGMINVLARRCQQT
GCLRHPNFGFPGDRRSSFCREHRKTGMVDIVSRHCRDPSCTRRRLYNMKG
LRPVSCSRHKLPGMIDVVSTRCQALGCFCHPSFGYTSDMKARRCARHRLE
NMEGVKGHQRQKCNLGIAAAAAVASASPASYPGPSSSASPSPPIFRSSPL
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