prot_L-elsbetiae_contig1513.3672.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1513.3672.1
Unique Nameprot_L-elsbetiae_contig1513.3672.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length584
Homology
BLAST of mRNA_L-elsbetiae_contig1513.3672.1 vs. uniprot
Match: A0A6H5KCS4_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCS4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 8.840e-50
Identity = 196/565 (34.69%), Postives = 279/565 (49.38%), Query Frame = 0
Query:    1 MTMAGQQDGVTDVLCLHQTVAVPPQLSDEGRYSVLMFFDTASVLLENPEQGGRGREGQVEGIDGGLDTTFDREEGNDFDKAGDDKRRQRSRQQACHDLSKAMAILLSDG-DIDVEDDLQVPEVEAAASFNDSRESENPTGGRNRSCTSKTSRIVDGIRRFEGKHAGGEAR----GGDHGTEGEI--DPEQVSSTLERPSSLGSHHESDALSRDLQGELDGELLEARLARECGIVNELRGDSFE--------GLPISDAPRTYGGCDQSKEGGVEEERHATTRNNEQHVRPIP---PSYSAAES--GAAEYSSGDDSSATPRVDLLLSPHHVSMSVRSTATAEKQEKAREPI---------------RSPHRDSSNGG--TAVDETLSTTSRVPPAIDSTPTYHRRSQGEAENDTAMGKRKDELSRNRQDTKLPPSLDGYEDDFCCADEDESPSLAQPE-VEGEGSIGKRFDAAAXXXXXXXXXXXXKFEGMESRSGMIDGGDGGGIAGGLDNLTDGYSSSTSDGVFSGTVAGGLELDQNGIISDGVGYGQYGNDDTSLGGLSEGS 527
            MTM  Q+DG+T+VLC+HQ V VPPQLS+EGRYSVL+FFDTASVLLENP +     +G+   I G        ++ +     G D+ R++ RQ+ C+ LS+AMA+LL+D   +D+ + L     EA  SF  + +++  +     S   +++RIV  IRR   K  GGEA     GG  G  GE+     Q   +L +    G+ + SD +SR    E +G+ L   L  + GIV+E +  +          G P++      G  D+ +EG          R  +QH + +P   P++SAA    GAAEYSSGD++S  PR DLL SP       R  ATAE      EP                   H   SNGG  ++ D +  + S  PP   S  +  R  + E E  T      D  +  R+ +  P     YEDDFCC +EDES SL+ P   + EG +  ++ ++                 +    G+ DG D  G   G  +  D YSSS+SD V+SGTVAGGL+++ +G   DGV   +  ND+ +  G  EGS
Sbjct:  124 MTMGEQRDGLTNVLCVHQPVTVPPQLSEEGRYSVLLFFDTASVLLENPRRQATEEQGEGGEIGG--------KQADSLYLKGKDQDREQYRQRTCYSLSRAMALLLADNVAVDIANGLLK---EAYVSFEGNNDTDYQSETLTPSSDDRSARIVHEIRRLGSKEVGGEAGDVYLGGQRGN-GEVRGPTSQEQRSLLQSKRSGTTYCSDDVSRYPTEEREGKYLRGDLLMDSGIVDEQQHGASHIEDQLICSGQPVNGRGSRSGDDDEEEEGRTS----GNIRRIQQHRQQLPKSFPAFSAATESCGAAEYSSGDETSTEPRDDLLGSPG------REGATAEATASPAEPKLFDGGDERIDGEFNNNVHHGGLSNGGGNSSFDRSFLSPSSRPPMAGSRISLDRTQESEEEAGT------DTTTVQREGSDDP-----YEDDFCCDEEDESLSLSLPRPAQEEGRVTGKYISSDITINNGPV--------VGGHRGVDDGFDVKGHWQG--DKDDAYSSSSSDDVYSGTVAGGLQINLHGGGVDGVESERDDNDELTWEGSPEGS 645          
BLAST of mRNA_L-elsbetiae_contig1513.3672.1 vs. uniprot
Match: D7G7J5_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J5_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.110e-49
Identity = 208/577 (36.05%), Postives = 279/577 (48.35%), Query Frame = 0
Query:    1 MTMAGQQDGVTDVLCLHQTVAVPPQLSDEGRYSVLMFFDTASVLLENPEQGGRGREGQVEGIDGGLDTTFDREEGNDFDKAGDDKRRQRSRQQACHDLSKAMAILLSDG-DIDVEDDLQVPEVEAAASFNDSRESENPTGGRNRSCT----SKTSRIVDGIRRFEGKHAGGEAR----GGDHGTEGEI--DPEQVSSTLERPSSLGSHHESDALSRDLQGELDGELLEARLARECGIVNELR--GDSFEGLPISDAPRTYGGCDQSKEGGVEEERHATTRNN----EQHVRPIP---PSYSAA--ESGAAEYSSGDDSSATPRVDLLLSPHHVSMSVRSTATAEKQEKAREP---------------IRSPHRDSSNGG--TAVDETLSTTSRVPPAIDSTPTYHRRSQGEAENDTAMGKRKDELSRNRQDTKLPPSLDGYEDDFCCADEDESP--SLAQPEVEGEGSIGKRFDAAAXXXXXXXXXXXXKFEGMESRSGMIDGGDGG--GIAGGLD-------NLTDGYSSSTSDGVFSGTVAGGLELDQNGIISDGVGYGQYGNDDTSLGGLSEGS 527
            MTM  QQDG+T+VLC+HQ V VPPQLS+EGRYSVL+FFDTASVL ENP +  +  E Q EG +         ++ +     G D+ R++ RQ+ C+ LS+AMA LL+D  D+D+ D L     EA  SF    +  N TG ++ + T     K++RIV G RR       GEA     GG  G+ GE+     Q    L +    G+ + SD +SR    E  GE L   L  E GIV+E +      EG   S      G   +    G ++     T  N    +QH        P++SA     GAAEYSSGD+SS  PR DLL SP       R  ATA       EP                   H D SNGG  ++ D +L + S  PP   S  +  R  + E E  T      D  +  R+ +  P     YEDDFCC +EDES   SL++PE E EG +  +  ++                G ++  G  +   GG  G+ GG D       +  D YSSS+SDGV+SGTVAGGL+++ +G   DGV   +  ND+ +  G  EGS
Sbjct:  112 MTMGEQQDGLTNVLCVHQPVTVPPQLSEEGRYSVLLFFDTASVLFENPPR--QATEQQAEGGE------VRGQQADSLYLKGKDQDREQYRQRTCYSLSRAMATLLADNVDVDIADGLLK---EACVSF----DGNNDTGYQSETLTPSGDDKSARIVHGRRRLGSNDIEGEAGDVYLGGQRGS-GEVRGPTSQEQRPLLQSKRSGTTYRSDDVSRYAAEERKGEYLRGDLLLESGIVDEQQHGASHIEGHLTSSGQLENG---RGSRSGDDDXXXGRTSGNIRRIQQHXXXXXXXSPAFSAXTESGGAAEYSSGDESSTEPRDDLLTSPG------REEATAAATVSPAEPKLFDGGDERIDGGSNSNVHHGDLSNGGGNSSFDRSLFSPSSRPPVAGSRISLDRTQESEEEAGT------DATTMQRKGSDDP-----YEDDFCCDEEDESLPLSLSRPEQE-EGRVTVKNISSDNTIN----------HGPDNGGGWGEAVTGGHRGVDGGFDVKGHWQDDKDDSYSSSSSDGVYSGTVAGGLKINLHGGGVDGVESERDDNDELTWEGSPEGS 641          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1513.3672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCS4_9PHAE8.840e-5034.69PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G7J5_ECTSI4.110e-4936.05PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1513contigL-elsbetiae_contig1513:14713..16542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1513.3672.1mRNA_L-elsbetiae_contig1513.3672.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1513 13634..16938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1513.3672.1 ID=prot_L-elsbetiae_contig1513.3672.1|Name=mRNA_L-elsbetiae_contig1513.3672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=584bp
MTMAGQQDGVTDVLCLHQTVAVPPQLSDEGRYSVLMFFDTASVLLENPEQ
GGRGREGQVEGIDGGLDTTFDREEGNDFDKAGDDKRRQRSRQQACHDLSK
AMAILLSDGDIDVEDDLQVPEVEAAASFNDSRESENPTGGRNRSCTSKTS
RIVDGIRRFEGKHAGGEARGGDHGTEGEIDPEQVSSTLERPSSLGSHHES
DALSRDLQGELDGELLEARLARECGIVNELRGDSFEGLPISDAPRTYGGC
DQSKEGGVEEERHATTRNNEQHVRPIPPSYSAAESGAAEYSSGDDSSATP
RVDLLLSPHHVSMSVRSTATAEKQEKAREPIRSPHRDSSNGGTAVDETLS
TTSRVPPAIDSTPTYHRRSQGEAENDTAMGKRKDELSRNRQDTKLPPSLD
GYEDDFCCADEDESPSLAQPEVEGEGSIGKRFDAAAGNNNNNNNNNNNKF
EGMESRSGMIDGGDGGGIAGGLDNLTDGYSSSTSDGVFSGTVAGGLELDQ
NGIISDGVGYGQYGNDDTSLGGLSEGSVGEDDVWGIRSPPRSSASNNYHE
VSSRTGDRRKVHGTDDNHPLVSEETDRSGGGDC*
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