prot_L-elsbetiae_contig15072.3638.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15072.3638.1
Unique Nameprot_L-elsbetiae_contig15072.3638.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length767
Homology
BLAST of mRNA_L-elsbetiae_contig15072.3638.1 vs. uniprot
Match: A0A6H5KAJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ9_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 3.960e-70
Identity = 216/419 (51.55%), Postives = 245/419 (58.47%), Query Frame = 0
Query:    9 TAG--VVGVARDIFCFQNEPFDCEAYLGGDEAAGVTLQLAGTIRCNVCKASAFTGIGSAEGAPVPAPVAADDDDGLSEKGQERAQGGTPSPAGPGAGDTGGGAGD-----VLEGESEPELLGATGGMRWVVVGLIVAIGGALLVCMCLLTVCRTKGKKRKGTGTLELLDGAGDSGAGAG--SATVGPR---TSSVAADAQERGLGGGGSAAVREGTATQGPFYAT------------------------SPRALAAAGGGADSGTDSSRPNSRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDPRRDTSDSAVAVVNVPTTPHSSELRARELSRQRSIE--RAFDGDGWASPPLVSAWGEGVPVGGGGHVAVSAKRGTPTRRRGFAAL-EDELYKEDKRG 388
            TAG  +VGVA DI+CFQN+P+DCEAY G D    + +QL GT+RCNVC+ SAFTGIGSA GAP PAP+  DDDDGLS+ GQERAQGGTPSPAG                 V E ESEPELLG TG MRWVVVGLI A+G ALL+C+C+LTVCR +  K +G   LE+ DG           SA VGPR   TS+ A D  ERGL                                             S R +A A        D S  +SRRPS          XXXXXXXXXXXXXXXXXX                RDPRR+T DSAVAVVNV  TP SSELR REL+RQRS+E   A + +GW SPPLVSAWGEG  VGG GHVA+SA R TPT+R GFAAL ED    E++RG
Sbjct:  450 TAGSTLVGVATDIYCFQNDPYDCEAYFG-DSDGEIAVQLTGTVRCNVCQGSAFTGIGSAAGAPTPAPIVTDDDDGLSQMGQERAQGGTPSPAGVDGSXXXXXXXXXXXXXVPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRR--KGRGERALEMADGXXXXXXXXXXTSAMVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGA-------ADLSSSSSRRPSGTESSRSVSRXXXXXXXXXXXXXXXXXXNGEGGGG---------RDPRRETVDSAVAVVNV-ETPLSSELRERELARQRSVELNAAREEEGWMSPPLVSAWGEGAVVGGKGHVALSA-RNTPTKR-GFAALPEDATAGEERRG 846          
BLAST of mRNA_L-elsbetiae_contig15072.3638.1 vs. uniprot
Match: D7G311_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G311_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.550e-50
Identity = 197/414 (47.58%), Postives = 224/414 (54.11%), Query Frame = 0
Query:    9 TAG--VVGVARDIFCFQNEPFDCEAYLGGDEAAGVTLQLAGTIRCNVCKASAFTGIGSAEGAPVPAPVAADDDDGLSEKGQERAQGGTPSPAGPGAGDTGGGAGDVL-----EGESEPELLGATGGMRWVVVGLIVAIGGALLVCMCLLTVCRTKGKKRKGTGTLELLDGAGDSGAGAGSAT-VGPRTS---SVAADAQERGLGGGGSAAVREGTATQGPF----YATSPRALAA----------------AGGGADSGTDSSRPNSRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDPRRDTSDSAVAVVNVPTTPHSSELRARELSRQRSIE--RAFDGDGWASPPLVSAWGEGVPVGGGGHVAVSAKRGTPTRRRGFAALEDELYK-EDKRG 388
            TAG  +VGVARDI+CFQN+P+DCEAY G D    + +QL GT+RCN C+ SAFTGIGSA GAP PAP+ ADDDDGLS+ GQERAQGGTPSPAG                   E ESEP+LLG TG MR                            +K +G   LEL                VGPR     + A D  ERGL G  +                 +ATSP   AA                A  GA    D S  +SRRPS      XXXXXXXXXX   XXXXXXXXXXX              RDPRR+T DSAVAVVNV  TP SSELR  EL+RQRS+E   A + +GW SPPLVSAWGEG  VGG GHVA+SA R TPT+R GFA L D+    E++RG
Sbjct:  473 TAGSTLVGVARDIYCFQNDPYDCEAYFG-DSDGEIAVQLTGTVRCNACQGSAFTGIGSAAGAPTPAPIVADDDDGLSQMGQERAQGGTPSPAGVDGSXXXXXXXXXXXXXXPEEESEPDLLGTTGTMR----------------------------RKGRGERALELAGXXXXXXXXXXXXXXVGPRXXXXXAAADDTAERGLRGTNNGXXXXXXXXXXXXXXXXWATSPGTSAAXXXXXXXXXXRSGSRRAVAGA---ADPSSSSSRRPSGTGSSRXXXXXXXXXXDLSXXXXXXXXXXXEDGGG---------RDPRRETVDSAVAVVNV-ETPLSSELRELELARQRSVELKAAREEEGWMSPPLVSAWGEGAVVGGNGHVALSA-RNTPTKR-GFAVLPDDATAGEERRG 842          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15072.3638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAJ9_9PHAE3.960e-7051.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G311_ECTSI1.550e-5047.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..766
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..129
NoneNo IPR availableTMHMMTMhelixcoord: 130..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15072contigL-elsbetiae_contig15072:1222..3945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15072.3638.1mRNA_L-elsbetiae_contig15072.3638.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15072 260..4024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15072.3638.1 ID=prot_L-elsbetiae_contig15072.3638.1|Name=mRNA_L-elsbetiae_contig15072.3638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=767bp
MADVSSSSTAGVVGVARDIFCFQNEPFDCEAYLGGDEAAGVTLQLAGTIR
CNVCKASAFTGIGSAEGAPVPAPVAADDDDGLSEKGQERAQGGTPSPAGP
GAGDTGGGAGDVLEGESEPELLGATGGMRWVVVGLIVAIGGALLVCMCLL
TVCRTKGKKRKGTGTLELLDGAGDSGAGAGSATVGPRTSSVAADAQERGL
GGGGSAAVREGTATQGPFYATSPRALAAAGGGADSGTDSSRPNSRRPSGT
DSSRPNSRRPSGTDSSQPNSRRPSGTDSSRPNSRRPSGRDRDRDPRRDTS
DSAVAVVNVPTTPHSSELRARELSRQRSIERAFDGDGWASPPLVSAWGEG
VPVGGGGHVAVSAKRGTPTRRRGFAALEDELYKEDKRGSRSKSKSRSRSR
EKKNSDGGSPRDRAAPTGALADSSDAAAAAAAARPRGRREERGRGSGSTR
TRSKGSGSTGARPKESGSSTRARSRESGSTGAQSGTRSRSRARERGSGEE
AVVAERRSSRSAERESQQQQQQHVPRPSRSRTRIKPPSGATHGTPSRERT
ADRAVARAVKTPAGGARLSISAATASSPPRTAAAAAAAAAAAAGSGKGGG
RGRASTSRRSATAAADAAAVAGVATELEASGESRRRPGATAVSSEENPVY
SHDRADGRSSTRGSGSTRRTSSRERHGIMSRSPLRRSSPSRSRSRADSGE
RGSAARGGGWASELYRISPGPKKDRSARVYSGKFDSSRSDWSADGEVEWN
RHSPSVTGDGGDKRFK*
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