prot_L-elsbetiae_contig14999.3583.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14999.3583.1
Unique Nameprot_L-elsbetiae_contig14999.3583.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 3.630e-72
Identity = 132/171 (77.19%), Postives = 133/171 (77.78%), Query Frame = 0
Query:    1 MSRHCVSVLLLVCIAQACLAFVPSWTATFRSSRLQPPPSTPATATCSLSQPSGATCPVFGACGTCGAQFFYPVRGMTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKIEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR 171
            MSR+CVSVLLLV IAQACLAFVPSWTATFRSSR QPP STPA AT SLSQPSG  CPVFGAC TCGAQFFYPV GMTSLSAMSEG EEEGGGDH AREAAD  PAADEIRAVQ                        D IEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLR 171          
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.130e-63
Identity = 128/141 (90.78%), Postives = 128/141 (90.78%), Query Frame = 0
Query:   76 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKIEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGXXXXXXXXKEQLRELLLNELLLKKEDRLSRIEQLHANNAPA 216
            MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERK EDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQ      XXXXXXXX    RELLLNELLLKKEDR SRIEQL ANNAPA
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXX---XRELLLNELLLKKEDRFSRIEQLRANNAPA 138          
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.930e-56
Identity = 120/153 (78.43%), Postives = 124/153 (81.05%), Query Frame = 0
Query:   70 FYPVRGMTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKIEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGXXXXXXXXKEQLRELLLN------ELLLKKEDRLSRIEQLHANNAPA 216
            FYPVRGMT LSAMSEGDEEEGGGDH AREAADR+PAADEIRAVQD+IRGVERKIEDAE+ETAEVVKKIDDIEAAIAGG+RYLGMTDPEALLKQL    EQLRR   XXXXXXXX                ELLLK EDRLSR EQ  ANNAPA
Sbjct:    2 FYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL----EQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150          
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 4.920e-47
Identity = 109/149 (73.15%), Postives = 112/149 (75.17%), Query Frame = 0
Query:   76 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKIED-------AEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGXXXXXXXXKEQLRELLLNELLLKKEDRLSRIEQLHANNAPAG 217
            MTS SAMSEGDEEEGGGDHDAREAAD  PAADEIRAVQ                   AE+ETAEVVKKID IEAAIAGGS+YLGMTDPEALLKQLGRKEEQLRRKEG  XXXXXX           +LLKKEDRLSRIEQL ANNAPAG
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXX-----XXXXXILLKKEDRLSRIEQLRANNAPAG 144          
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.490e-25
Identity = 79/148 (53.38%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   71 YPVRGMTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKIEDAEKETAEVVKKIDDIEAA-IAGGSRYLGMTDPEALLKQLGRKEEQLRRKEGXXXXXXXXKEQLRELLLNELLLKKEDRLSRIEQLHANNAPAG 217
            YPVRG+TSLSA+SEG+EE+GGGDHD REAA   PAADEIRAVQ                      KIDD+EAA IAGGS YLGMTDPEALLK+  R              XXXX            +L KE RL  IEQ  ANNAPAG
Sbjct:    3 YPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEKER------------LGXXXXXXXXXXXXXXXQVLVKEKRLFSIEQRRANNAPAG 138          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14999.3583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM56_ECTSI3.630e-7277.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI1.130e-6390.78Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI1.930e-5678.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI4.920e-4773.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI1.490e-2553.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..200
NoneNo IPR availableCOILSCoilCoilcoord: 109..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.852
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14999contigL-elsbetiae_contig14999:2970..4056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14999.3583.1mRNA_L-elsbetiae_contig14999.3583.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14999 2963..4056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14999.3583.1 ID=prot_L-elsbetiae_contig14999.3583.1|Name=mRNA_L-elsbetiae_contig14999.3583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MSRHCVSVLLLVCIAQACLAFVPSWTATFRSSRLQPPPSTPATATCSLSQ
PSGATCPVFGACGTCGAQFFYPVRGMTSLSAMSEGDEEEGGGDHDAREAA
DRIPAADEIRAVQDDIRGVERKIEDAEKETAEVVKKIDDIEAAIAGGSRY
LGMTDPEALLKQLGRKEEQLRRKEGKEEQLRREKEQLRELLLNELLLKKE
DRLSRIEQLHANNAPAGAHRRGGGVDPLLRCLPVIF*
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