prot_L-elsbetiae_contig14865.3513.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14865.3513.1
Unique Nameprot_L-elsbetiae_contig14865.3513.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length50
Homology
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: D7FKX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.800e-19
Identity = 45/49 (91.84%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            RDLAQNWDVDIA+SLEDYLEDLE ITITLDGGASKVNFAEAALLIQ  T
Sbjct:  125 RDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGST 173          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A6H5KBI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI6_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.800e-19
Identity = 45/49 (91.84%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            RDLAQNWDVDIA+SLEDYLEDLE ITITLDGGASKVNFAEAALLIQ  T
Sbjct:   21 RDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGST 69          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: I2CS40_NANGC (Condensin-2 complex subunit h2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS40_NANGC)

HSP 1 Score: 72.8 bits (177), Expect = 9.200e-16
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            RDLA+NWD+DIASSLEDYL++L+ + I+LDGG + +NFAEAALLIQ CT
Sbjct:    5 RDLARNWDIDIASSLEDYLDELDGMEISLDGGQTNLNFAEAALLIQ-CT 52          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: UPI000711F5B5 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711F5B5)

HSP 1 Score: 70.9 bits (172), Expect = 3.820e-15
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQV 47
            RDLA NW++D+A+ LE+YLEDLE + I+ DGG S +NFAEAAL+IQV
Sbjct:   18 RDLADNWNIDVAAELEEYLEDLESVVISFDGGKSNLNFAEAALMIQV 64          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: UPI0003F0B0A6 (condensin-2 complex subunit H2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B0A6)

HSP 1 Score: 74.3 bits (181), Expect = 2.520e-14
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            RDLAQNW+VD+AS LE+YL +LED+ IT DGGA+ +NFAEAALLIQ  T
Sbjct:   11 RDLAQNWEVDVASRLEEYLTELEDVRITFDGGATTMNFAEAALLIQSST 59          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A0B7A6B1_9EUPU (CNDH2_N domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A6B1_9EUPU)

HSP 1 Score: 69.3 bits (168), Expect = 2.870e-14
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQ 46
            RDLA+NWDVDIA  LE+YLEDLE I IT D GA+ +NF+EAALLIQ
Sbjct:   23 RDLAKNWDVDIAHFLEEYLEDLEKIEITFDDGATTMNFSEAALLIQ 68          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A4D9CZL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZL0_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.030e-14
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQ 46
            RDLA+NWD+DIASSLEDYL++L+ + I+LDGG + +NFAEAALLIQ
Sbjct:   17 RDLARNWDIDIASSLEDYLDELDGMEISLDGGQTNLNFAEAALLIQ 62          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A836CG43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG43_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.890e-14
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            R+LA NW +DIA+SLEDYLE+LE ITITL+GG S +NFAEAALLIQ  T
Sbjct:   17 RELASNWSIDIATSLEDYLEELEHITITLEGGESNLNFAEAALLIQGST 65          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A1X7SK62_AMPQE (CNDH2_N domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SK62_AMPQE)

HSP 1 Score: 68.2 bits (165), Expect = 9.800e-14
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQ 46
            RDLA+NWDVD+AS LE+YL +LE+ITI  +GG + +NFAEAAL+IQ
Sbjct:   18 RDLAKNWDVDVASELEEYLLELEEITIAFEGGKANLNFAEAALVIQ 63          
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Match: A0A7S3HGU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGU5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.130e-13
Identity = 31/49 (63.27%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT 49
            +D+A NWD+DIA SL +YLEDL+++ I++DGG S +NFAEAALLIQ  T
Sbjct:   16 KDIAANWDIDIAESLTEYLEDLDNLRISIDGGKSNLNFAEAALLIQGST 64          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14865.3513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX7_ECTSI3.800e-1991.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBI6_9PHAE3.800e-1991.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I2CS40_NANGC9.200e-1671.43Condensin-2 complex subunit h2 (Fragment) n=1 Tax=... [more]
UPI000711F5B53.820e-1565.96hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
UPI0003F0B0A62.520e-1471.43condensin-2 complex subunit H2-like n=1 Tax=Saccog... [more]
A0A0B7A6B1_9EUPU2.870e-1473.91CNDH2_N domain-containing protein (Fragment) n=1 T... [more]
A0A4D9CZL0_9STRA3.030e-1471.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CG43_9STRA3.890e-1473.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X7SK62_AMPQE9.800e-1467.39CNDH2_N domain-containing protein n=2 Tax=Amphimed... [more]
A0A7S3HGU5_9STRA1.130e-1363.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009378Condensin II complex subunit H2, N-terminalPFAMPF06278CNDH2_Ncoord: 1..47
e-value: 1.2E-19
score: 70.6
IPR031739Condensin-2 complex subunit H2PANTHERPTHR14324FAMILY NOT NAMEDcoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14865contigL-elsbetiae_contig14865:3226..3375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14865.3513.1mRNA_L-elsbetiae_contig14865.3513.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14865 3226..3375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14865.3513.1 ID=prot_L-elsbetiae_contig14865.3513.1|Name=mRNA_L-elsbetiae_contig14865.3513.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=50bp
RDLAQNWDVDIASSLEDYLEDLEDITITLDGGASKVNFAEAALLIQVCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009378H2_N
IPR031739Ncaph2