prot_L-elsbetiae_contig1451.3312.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1451.3312.1
Unique Nameprot_L-elsbetiae_contig1451.3312.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length446
Homology
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BLAST of mRNA_L-elsbetiae_contig1451.3312.1 vs. uniprot
Match: D7FQL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL7_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.030e-45
Identity = 128/291 (43.99%), Postives = 167/291 (57.39%), Query Frame = 0 
Query:   69 EDNGTSDEDLPDADRQQRSPSSSAVDMKSVAATADTHQHHQEREDTITSLAGGYYAKPRK---QQVAH---GSDGEAAI-------NYQNKRMARKITQLEANLAASEGRISHLISSSAGAAENASRLRRETETIAATKEAYAXXXXXXXXXXXXXXXRASWLQGELEVVWACGIQRVAELEYDLELARRQQIVTRAEESLSTANGSVENESTTEQGSTDTSGRSSLSDESTQNGNPRHGLV--LETRDGLDKMMSDTHKALSCLRKKFHRAMGENEELQARCNHFEGNLV 344
            +D+ T+ ED  + DR+Q    S  V  K++A T+  HQ +Q   +     AGGYYA+P+K   Q +AH   GS+  AA+         +  RMA KITQLEA L AS+GR++ L+SSSA AAENASR RRE E     + A+                RASWL GEL+VVWACGIQRV ELEY+LE+ RRQQ         ST  G  E +S TE GS    G +       ++ +P H  V  +E  +GLDKMM DT +ALS LR KF+RA+GE  +L+ RC+  E  L+
Sbjct:   74 DDDQTTGEDRGEYDREQIPWQSFVVARKTLATTSLVHQQNQAEPEGADIHAGGYYARPKKGPPQSIAHRDAGSNVAAAVFTASVRQQQEKARMATKITQLEAALVASQGRVAQLVSSSAIAAENASRRRREKEAAIDKERAFHRRVSQLEDALAQAEKRASWLHGELKVVWACGIQRVNELEYELEVTRRQQA------HASTGYGPEETDSATENGSAAPFGGNF------RDASPHHEAVEPVEYGNGLDKMMDDTKQALSDLRTKFYRAIGERNDLKVRCDLLEQQLL 352
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1451.3312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQL7_ECTSI1.030e-4543.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableCOILSCoilCoilcoord: 315..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1451contigL-elsbetiae_contig1451:11863..13622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1451.3312.1mRNA_L-elsbetiae_contig1451.3312.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1451 11224..13745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1451.3312.1 ID=prot_L-elsbetiae_contig1451.3312.1|Name=mRNA_L-elsbetiae_contig1451.3312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=446bp
MSWVRSRIADLEASSGTSIGRTIVAPPCSSPAASARSTIPTVCQRERPEQ
VQPSIESVPQLSGTSSADEDNGTSDEDLPDADRQQRSPSSSAVDMKSVAA
TADTHQHHQEREDTITSLAGGYYAKPRKQQVAHGSDGEAAINYQNKRMAR
KITQLEANLAASEGRISHLISSSAGAAENASRLRRETETIAATKEAYARR
IYQLEGTLAQAEKRASWLQGELEVVWACGIQRVAELEYDLELARRQQIVT
RAEESLSTANGSVENESTTEQGSTDTSGRSSLSDESTQNGNPRHGLVLET
RDGLDKMMSDTHKALSCLRKKFHRAMGENEELQARCNHFEGNLVGNTSGS
TVAATSSESSNQRSALRGHQQRTSETSETTKPSSDRNRSRSNSSSASSSA
SSSASSSATVAVQPAPVTTVGGRSPSWCWSPPASTGPRVSARDDE*
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