prot_L-elsbetiae_contig144.3245.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig144.3245.1
Unique Nameprot_L-elsbetiae_contig144.3245.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length52
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig144.3245.1 vs. uniprot
Match: A0A6H5JSE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE1_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 1.400e-6
Identity = 23/27 (85.19%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:   26 LKRQKRIEHLLHLTLPLKMNWVTITWR 52
            LKR KRIEHLLHLTLPL MNWV  TWR
Sbjct:   20 LKRPKRIEHLLHLTLPLNMNWVNRTWR 46
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig144.3245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSE1_9PHAE1.400e-685.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig144contigL-elsbetiae_contig144:22237..22684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig144.3245.1mRNA_L-elsbetiae_contig144.3245.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig144 22233..22684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig144.3245.1 ID=prot_L-elsbetiae_contig144.3245.1|Name=mRNA_L-elsbetiae_contig144.3245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=52bp
MQAPRRAPVLARVLCLIERLDLVQTLKRQKRIEHLLHLTLPLKMNWVTIT
WR
back to top