prot_L-elsbetiae_contig14339.3205.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14339.3205.1
Unique Nameprot_L-elsbetiae_contig14339.3205.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14339.3205.1 vs. uniprot
Match: D8LFP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP5_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.460e-17
Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 0 
Query:    2 VSKSTFSLALLKRLATCALKVAPSSVTRITFDKQTPRFSRCDRAWLSKYGDEFCSGASLVVHVNSPTAASRLLGRGGG-HRP 82
            VSKS FSL L+KRLAT AL+V P  +TR TF K+   FS  D +WL +YG+E C+GA LVV++N P   SR  G GGG H+P
Sbjct:  483 VSKSAFSLPLVKRLATRALEVCPGHITRTTFGKRNSVFSGNDDSWLHQYGEECCNGARLVVYINVPKDKSRPGGNGGGGHQP 564
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14339.3205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFP5_ECTSI1.460e-1756.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14339contigL-elsbetiae_contig14339:2241..3539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14339.3205.1mRNA_L-elsbetiae_contig14339.3205.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14339 2239..3539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14339.3205.1 ID=prot_L-elsbetiae_contig14339.3205.1|Name=mRNA_L-elsbetiae_contig14339.3205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
FVSKSTFSLALLKRLATCALKVAPSSVTRITFDKQTPRFSRCDRAWLSKY
GDEFCSGASLVVHVNSPTAASRLLGRGGGHRPPGMDADDDSA
back to top