prot_L-elsbetiae_contig14164.3094.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14164.3094.1
Unique Nameprot_L-elsbetiae_contig14164.3094.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14164.3094.1 vs. uniprot
Match: A0A6H5K5N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N0_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.420e-16
Identity = 44/71 (61.97%), Postives = 60/71 (84.51%), Query Frame = 0 
Query:    1 TQAEAQSLREIVHASLEQSKTMQQASVDLRQRVALGEECLQEALKETLSLREEITKRKQHGEVLLARIRSL 71
            TQ + QSLR++V AS ++S+ +++ S  LR++VA+GEECL +AL+E+LSLREEI +RKQHGEVLLARIR L
Sbjct:  217 TQVDLQSLRDVVQASFKESQAVKKESAALREKVAIGEECLHDALQESLSLREEIARRKQHGEVLLARIRFL 287
[Close]
BLAST of mRNA_L-elsbetiae_contig14164.3094.1 vs. uniprot
Match: D8LEA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA8_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 6.780e-16
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0 
Query:    1 TQAEAQSLREIVHASLEQSKTMQQASVDLRQRVALGEECLQEALKETLSLREEITKRKQHGEVLLARIRSL 71
            TQ + QSLR++V AS ++S+ +++ S  LR++VA+GEECL +AL+E LSLREEI +RKQHGEVL ARIR L
Sbjct:  315 TQVDLQSLRDVVQASFKESQAVKEESAALREKVAIGEECLYDALQEALSLREEIARRKQHGEVLFARIRFL 385
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14164.3094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5N0_9PHAE1.420e-1661.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEA8_ECTSI6.780e-1660.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14164contigL-elsbetiae_contig14164:339..1069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14164.3094.1mRNA_L-elsbetiae_contig14164.3094.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14164 339..1069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14164.3094.1 ID=prot_L-elsbetiae_contig14164.3094.1|Name=mRNA_L-elsbetiae_contig14164.3094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
TQAEAQSLREIVHASLEQSKTMQQASVDLRQRVALGEECLQEALKETLSL
REEITKRKQHGEVLLARIRSLK
back to top