prot_L-elsbetiae_contig13792.2870.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13792.2870.1
Unique Nameprot_L-elsbetiae_contig13792.2870.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length729
Homology
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BLAST of mRNA_L-elsbetiae_contig13792.2870.1 vs. uniprot
Match: D7G361_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G361_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.030e-13
Identity = 123/222 (55.41%), Postives = 139/222 (62.61%), Query Frame = 0 
Query:    1 SSKRGCSGGSPCEHCEKRGKACVYAKRRKSGPRGRPAAGRSSKGRSRAXXXXXXXXXXXXXXXXXXXT------SP-PTLVKTP------GDAGDAEXXXXXXXXSGSGRDGVADENAVSRN----DETALEWEKRRLS-RHHXXXXXXXXXXXXXXXXXXXXXXXXRQQKAVAPKLQRR-PGEKWHPLLVESPT--PWDHGAASGKLEIPLPPSPALVLPP 201
            SSKRGCSGG PC+ CEKRGK C+YA+RRKSGPR RPA+GRSSKGRS  XXXXXXXXXXXXXXXXXXX       SP P + ++P      G AG  E        S  G +  A+   V R      E A E E+RRL    H XXXXXXXXXXXXXXXXXXXXXXX+    V P+  R  PG   +PLLV S    P      SG+LE+P+PP  A VL P
Sbjct:   25 SSKRGCSGGEPCDQCEKRGKPCIYAQRRKSGPRSRPASGRSSKGRSXXXXXXXXXXXXXXXXXXXXXXXXXXVESPSPVIARSPPSPAASGLAG--EDRVGVVAGSWDGGEAAAEVTEVERRRGSIGEDAWERERRRLGFTTHDXXXXXXXXXXXXXXXXXXXXXXXKPPDLVIPRPHRTDPGSTANPLLVRSSPAPPXXXXXXSGRLEVPMPPRSAHVLSP 244
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13792.2870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G361_ECTSI2.030e-1355.41Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 238..439
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 46..261
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 238..439
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 46..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13792contigL-elsbetiae_contig13792:118..2466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13792.2870.1mRNA_L-elsbetiae_contig13792.2870.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13792 118..2466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13792.2870.1 ID=prot_L-elsbetiae_contig13792.2870.1|Name=mRNA_L-elsbetiae_contig13792.2870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=729bp
SSKRGCSGGSPCEHCEKRGKACVYAKRRKSGPRGRPAAGRSSKGRSRAKA
RRESRAAAASAPASAEATSPPTLVKTPGDAGDAEDDGDDDDDSGSGRDGV
ADENAVSRNDETALEWEKRRLSRHHHHHHKQQQQQQQQQQQQTQTQTQKR
QQKAVAPKLQRRPGEKWHPLLVESPTPWDHGAASGKLEIPLPPSPALVLP
PTTNRGWVSAQGGGGEGRGRGEGPVALPRASSDQPAGSNKRARLSLALPA
PPSLASPSSSSQARGLSTLLLSRSTSLDRGGGGGGGGGGGNGGSGGGPAG
RWLSPFWNPPNVFSSFPSSRAPYGAPARSMSGSQHARGEVRGSVRPAPPH
PSISAWSGDGEDCGGQDGRVVDELESALGALFPMRGENMQQEQPQRRDQH
WQAHAHRLLPQDPQDRQRAQHQHQQQHQQQHQQQQQQQWRPPSTRQLSLG
SLLMCEDEELGASSNDDGDESSMTASLEGHETALTTAVTPMGDAPSQRGR
RRQRNTADSPPHGMVRVSPVDEVLARTVSTGSCAAGNAERGGHVSSYAAS
AGGALPALTAAGRVGGCGWSGDNLPPPAPGSQAFQQPLPFPLNRRTSDIA
ALMMTTTSSWGGPAAAAAAATVAQEGGATGGDFSGRASASAAAAAAASSR
LDCASMANLRTPLTREASLLQAVEAVASPPVGDPRPPRLSWEESLTRAME
VVAAPSGGGGDGDHGEAAAELVAGAGLGD
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