prot_L-elsbetiae_contig137.2816.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig137.2816.1
Unique Name	prot_L-elsbetiae_contig137.2816.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	622

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig137.2816.1 vs. uniprot
Match: D8LT62_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT62_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 2.240e-180
Identity = 418/608 (68.75%), Postives = 457/608 (75.16%), Query Frame = 0

Query:    1 MLKVNNSIASLSLEWNNIGTFEQGIQRLADGLEVNGCLTSLVLCNNHINAQGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAALSDRESGALVKTALWDDLHVSRGKAEHLEARLRRQATEDETHKRLDREREQKWQEDLMTAKKESARHRLDFERQMDASAKQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTKQMLLETRRDLTRQVERLQDALDSANEDRRITQSELEHVRDVFEGEIAGLKEELRASNAEIDTSRRAATRATAEAEQATTLYETAKAEVRLTGERADEAVAAVSKATREAATALEETRRMYEERVEASHADRDARVKAAEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQSEKRISNEAQKQFDLELAELRERIETVQKARDSKEAQARQRLASLEDLRVRSVAEQRDFGRELAALGEELEKSRDAARGSEGKASKLQQTELGVLQRATEGLQQRLEEAERDKRQASELHSSSTSKIQAQHGTELKDMERRVSEARAACGAAEETAKKHEERASALRQAHLQSLRLLERSVGQALGEAVASARQRG 608
            MLKVN+SIASLSLEWNNIGT ++G+QRLADGLEVN  LT+LVLCNNHI AQGA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     IQAALSDR+SG LVKTALWDDLHVSRGKAE LEARLRRQA E+E+HKRLDREREQKW+EDL+T K++SARHRLDFERQM ASAKQMA                                   KTKQ LLETRR+LTRQ ERL                                     A   EID SRRAATRA AEAEQAT L+ETA+AEVRLT ERADEAVAAV++ATR+ ATALEETRRMYEERVEAS ADRDARVK+AEERAXXXXXXXXXXX   QAASKELARLQVSVEER++Q+EKR+  EAQKQFDLELAELRERI+ VQK  +SKEAQ+R+ LASLEDLR+RS AE RDFGRELAA GEELEKSR++AR SEGKASKLQ  +LGV QR TEG                              G+ELKDMERR+SEARAAC AAE+TAK++EER SALRQ HL SLRLLE +VGQALG+AVASARQ G
Sbjct:   69 MLKVNSSIASLSLEWNNIGTCDEGLQRLADGLEVNRSLTALVLCNNHITAQGASCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLQESIQAALSDRDSGNLVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDREREQKWKEDLVTVKQDSARHRLDFERQMGASAKQMAELEEQLIHERSRGSSLGNKLERESERREAIQGELDKTKQTLLETRRELTRQTERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTTEIDASRRAATRAKAEAEQATALHETARAEVRLTAERADEAVAAVARATRDGATALEETRRMYEERVEASQADRDARVKSAEERAXXXXXXXXXXXAVRQAASKELARLQVSVEERISQNEKRVVVEAQKQFDLELAELRERIDAVQKITESKEAQSREYLASLEDLRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQ-ADLGVQQRVTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSELKDMERRLSEARAACRAAEKTAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIG 675

[Close]

BLAST of mRNA_L-elsbetiae_contig137.2816.1 vs. uniprot
Match: A0A6H5KCD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD5_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 2.040e-102
Identity = 228/332 (68.67%), Postives = 255/332 (76.81%), Query Frame = 0

Query:  277 VFEGEIAGLKEELRASNAEIDTSRRAATRATAEAEQATTLYETAKAEVRLTGERADEAVAAVSKATREAATALEETRRMYEERVEASHADRDARVKAAEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQSEKRISNEAQKQFDLELAELRERIETVQKARDSKEAQARQRLASLEDLRVRSVAEQRDFGRELAALGEELEKSRDAARGSEGKASKLQQTELGVLQRATEGLQQRLEEAERDKRQASELHSSSTSKIQAQHGTELKDMERRVSEARAACGAAEETAKKHEERASALRQAHLQSLRLLERSVGQALGEAVASARQRG 608
            +FE E+AGLKEELRA                      T L+ETA+AEVRLT ERADEAVAAV++ATR+ ATALEETRRMYEERVEAS ADRDARVK+AEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQ+EKR+  EAQKQFDLEL ELRERI+ VQ+  +SKEAQ+R+ LASLE+LR+RS AE RDFGRELAA GEELEKSR++AR SEGKASKLQ  +LGV QR  EGL                           QHG+ELKDMERR+SEARAAC AAE+ AK++EER SALRQ HL SLRLLE +VGQALG+AVASARQ G
Sbjct:    1 MFENEVAGLKEELRAV--------------------ITALHETARAEVRLTAERADEAVAAVTRATRDGATALEETRRMYEERVEASQADRDARVKSAEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQNEKRVVAEAQKQFDLELVELRERIDAVQRITESKEAQSREYLASLEELRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQ-ADLGVQQRVAEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXQHGSELKDMERRLSEARAACRAAEKNAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIG 311

[Close]

BLAST of mRNA_L-elsbetiae_contig137.2816.1 vs. uniprot
Match: A0A836CKE5_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE5_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.760e-48
Identity = 179/496 (36.09%), Postives = 259/496 (52.22%), Query Frame = 0

Query:  112 IQAALSDRESGALVKTALWDDLHVSRGKAEHLEARLRRQATEDETHKRLDREREQKWQEDLMTAKKESARHRLDFERQMDASAKQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTKQMLLETRRDLTRQVERLQDALDSANEDRRITQSELEHVRDVFEGEIAGLKEELRASNAEIDTSRRAATRATAEAEQATTLYETAKAEVRLTGERADEAVAAVSKATREAATALEETRRMYEERVEASHADRDARVKAAEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQSEKRISNEAQKQFDLELAELRERIETVQKARDSKEAQARQRLASLEDLRVRSVAEQRDFGRELAALGEELEKSRDAARGSEGKASKLQQTELGVLQRATEGLQQRLEEAERDKRQASELHSSSTSKIQAQHGTELKDMERRVSEARAACGAAEETAKKHEERASALRQAHLQSLRLLERSVGQALGEAVASARQR 607
            I+A L+DR +   +  A  DDLHV+R +AE LEARLRR A ++   +  + ERE++W  +L                                                                ++  ET+R L RQVERLQ A+D ANEDRR  Q + E  R   + E+A   EE R    E+D + R   R     +Q     +TA AEVRL  ER DE  A  ++A  E   A+EET                          XXXXXXXXXXXXXX    +ELARLQV +EE++A++E+ + +E + ++D E+ EL ERIE+VQK R+ +E + +   A L+  R +S AE R+  +EL    ++L+ +R+ +R +EGKA+KL  T++GVLQR  E LQ + +  ERD++  +E H  ST K+QAQH +E++ +ER++ EARAA  A E       E  +A R  H ++L +L++S+ Q+L EA  +AR R
Sbjct:  232 IEALLNDRGAAGELALATRDDLHVARERAEQLEARLRRTAADEAALRSKEAEREREWHAELA---------------------------------------------------------------RIHAETKRGLERQVERLQAAVDGANEDRRSEQRQSELARSSLDKELAETVEEARRLQTELDRALRNGKRLQTLTDQLQASLDTAHAEVRLLHERVDEHAALAARAASEGRAAVEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRELARLQVLLEEKVAEAERSVRDEQRNRYDAEVKELVERIESVQKMRELQEGELKGLTAQLDAQRSQSAAELRELNKELLRYRDQLDAAREGSRAAEGKAAKLS-TDVGVLQRKAEVLQSKCDSLERDRQHTAEAHQGSTDKLQAQHASEVRALERQLQEARAAISALEGKLTDCAEEMAAARAQHTRTLGVLDKSIAQSLAEAFEAARAR 663

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig137.2816.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig137.2816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LT62_ECTSI	2.240e-180	68.75	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5KCD5_9PHAE	2.040e-102	68.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CKE5_9STRA	2.760e-48	36.09	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 504..531
None	No IPR available	COILS	Coil	Coil	coord: 371..405
None	No IPR available	COILS	Coil	Coil	coord: 422..449
None	No IPR available	COILS	Coil	Coil	coord: 183..210
None	No IPR available	COILS	Coil	Coil	coord: 275..323
None	No IPR available	COILS	Coil	Coil	coord: 547..581
None	No IPR available	COILS	Coil	Coil	coord: 218..270
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 91..118 e-value: 260.0 score: 0.2 coord: 5..34 e-value: 67.0 score: 4.3 coord: 63..90 e-value: 0.88 score: 17.5 coord: 35..62 e-value: 2.8 score: 13.9
None	No IPR available	PANTHER	PTHR23170	NY-REN-58 ANTIGEN	coord: 2..605
None	No IPR available	PANTHER	PTHR23170:SF3	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45	coord: 2..605
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 2..119
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 90..107 e-value: 0.45 score: 10.7 coord: 63..84 e-value: 6.0E-5 score: 22.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 1..151 e-value: 5.0E-27 score: 96.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig137	contig	L-elsbetiae_contig137:4378..11333 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig137.2816.1	mRNA_L-elsbetiae_contig137.2816.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig137 4192..11815 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig137.2816.1 ID=prot_L-elsbetiae_contig137.2816.1|Name=mRNA_L-elsbetiae_contig137.2816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=622bp
MLKVNNSIASLSLEWNNIGTFEQGIQRLADGLEVNGCLTSLVLCNNHINA
QGAACLARALRANSTLKDLDLRWNEVGNDGARAIRDSLDTNRSLTSVKLS
GNKVDDDLQENIQAALSDRESGALVKTALWDDLHVSRGKAEHLEARLRRQ
ATEDETHKRLDREREQKWQEDLMTAKKESARHRLDFERQMDASAKQMAEL
EEQLIHERSRGSTVSSKLERESERRETVQGELDKTKQMLLETRRDLTRQV
ERLQDALDSANEDRRITQSELEHVRDVFEGEIAGLKEELRASNAEIDTSR
RAATRATAEAEQATTLYETAKAEVRLTGERADEAVAAVSKATREAATALE
ETRRMYEERVEASHADRDARVKAAEERARAAEHERQRAEAARQAASKELA
RLQVSVEERLAQSEKRISNEAQKQFDLELAELRERIETVQKARDSKEAQA
RQRLASLEDLRVRSVAEQRDFGRELAALGEELEKSRDAARGSEGKASKLQ
QTELGVLQRATEGLQQRLEEAERDKRQASELHSSSTSKIQAQHGTELKDM
ERRVSEARAACGAAEETAKKHEERASALRQAHLQSLRLLERSVGQALGEA
VASARQRGGGGGGSGGGGEAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf