prot_L-elsbetiae_contig1369.2807.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1369.2807.1
Unique Nameprot_L-elsbetiae_contig1369.2807.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: D1J7D7_ECTSI (Multifunctional fusion protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=D1J7D7_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 7.000e-88
Identity = 114/139 (82.01%), Postives = 132/139 (94.96%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDL+DDQIK+QV YAM KGWAVS+EWTDDPHPRNSYW+LWGLPLFD++DP+A++YEL ECR++NPEGYIKINAFDA+IGTESC MSF+VQRP+ EPGFYLER EV+GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFYLERNEVQGRNIQYTISSYAVQARPSGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: RBS_ECTSI (Ribulose bisphosphate carboxylase small subunit n=136 Tax=Phaeophyceae TaxID=2870 RepID=RBS_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.410e-87
Identity = 113/139 (81.29%), Postives = 131/139 (94.24%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDL+DDQIK+QV YAM KGWAVS+EWTDDPHPRNSYW+LWGLPLFD++DP+A++YEL ECR++NPEGYIKINAFDA+IGTESC MSF+VQRP+ EPGFYLER E+ GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRVTQGCFSFLPDLSDDQIKQQVSYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFYLERNEIHGRNIQYTISSYAVQARPSGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: A0A0R6LUN5_UNDPI (Multifunctional fusion protein n=44 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUN5_UNDPI)

HSP 1 Score: 259 bits (662), Expect = 2.850e-87
Identity = 115/139 (82.73%), Postives = 131/139 (94.24%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDLTD+QIKKQV YAM KGWAVS+EWTDDPHPRNSYW+LWGLPLFD+QD +A++YEL ECR++NPEGYIKINAFDA+IGTESCA+SF+VQRP +EPGFYLER EV GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRVTQGCFSFLPDLTDEQIKKQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDIQDAAALMYELAECRKVNPEGYIKINAFDASIGTESCALSFLVQRPANEPGFYLERNEVGGRNIQYTISSYAVQARPAGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: A0A0S0GBG1_COSCS (Multifunctional fusion protein n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GBG1_COSCS)

HSP 1 Score: 258 bits (660), Expect = 5.760e-87
Identity = 113/139 (81.29%), Postives = 131/139 (94.24%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDLTD+QIKKQV YAM KGWAVS+EWTDDPHPRN+YW+LWGLPLFD+QDP+A++YEL ECR++NPEGYIKINAFDA+IGTESC +SF+VQRP +EPGFYLER E+ GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRVTQGCFSFLPDLTDEQIKKQVAYAMTKGWAVSVEWTDDPHPRNAYWELWGLPLFDIQDPAALMYELGECRKVNPEGYIKINAFDASIGTESCVLSFIVQRPSNEPGFYLERNEIGGRNIQYTISSYAVQARPAGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: A0A2I4Q2E0_9PHAE (Multifunctional fusion protein n=11 Tax=Dictyopteris TaxID=112054 RepID=A0A2I4Q2E0_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.180e-87
Identity = 112/139 (80.58%), Postives = 130/139 (93.53%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +RLTQGCFSFLPDLTD+QIKKQVEYA+ K WAVS+EWTDDPHPRNSYW+LWGLPLFD++DP+A++YELN+CRR+NPEGYIK+NAFDA  GTESC +SF+VQRP +EPGFYLER E+ GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRLTQGCFSFLPDLTDEQIKKQVEYAITKEWAVSVEWTDDPHPRNSYWELWGLPLFDIKDPAALLYELNQCRRVNPEGYIKVNAFDANRGTESCVLSFIVQRPTEEPGFYLERNEIHGRNIQYTISSYAVQARPAGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: A0A7S6ZP87_9STRA (Multifunctional fusion protein n=3 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZP87_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.590e-84
Identity = 108/139 (77.70%), Postives = 128/139 (92.09%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +RLTQGCFSFLP L+D+QIKKQ++YA+ KGWA+S+EWTDDPHPRN+YWDLWGLPLFD++D + ++YELNECRR NPEGYIK+NAFDA+IGTESC MS++V RP DEPGFYLERTE  GR+IQY ISSY+VQARPEGDRY
Sbjct:    1 MRLTQGCFSFLPSLSDEQIKKQIDYAITKGWAISVEWTDDPHPRNTYWDLWGLPLFDIKDSATVMYELNECRRANPEGYIKLNAFDASIGTESCVMSYIVTRPSDEPGFYLERTETHGRNIQYKISSYSVQARPEGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: A0A1L2F1V1_9PHAE (Multifunctional fusion protein n=208 Tax=Fucales TaxID=3009 RepID=A0A1L2F1V1_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 2.250e-84
Identity = 109/139 (78.42%), Postives = 129/139 (92.81%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDL+D+QIK QV YA+ KGWAVS+EWTDDPHPRN+YW+LWGLPLFD++D +A++YELNECRR+NPEGYIKIN +DA+ GTESCA+SF+VQRP +EPGFYLER EV GR+IQYTISSYAVQARP GDRY
Sbjct:    1 MRITQGCFSFLPDLSDEQIKNQVNYAISKGWAVSVEWTDDPHPRNAYWELWGLPLFDIKDSAAVMYELNECRRINPEGYIKINCYDASKGTESCALSFIVQRPAEEPGFYLERNEVGGRNIQYTISSYAVQARPAGDRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: Q9GGQ1_VAULI (Multifunctional fusion protein n=2 Tax=PX clade TaxID=569578 RepID=Q9GGQ1_VAULI)

HSP 1 Score: 249 bits (637), Expect = 1.850e-83
Identity = 107/139 (76.98%), Postives = 129/139 (92.81%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQGCFSFLPDL+D+QIKKQ+EYA+ KGWA+SIEW+DDPHPRN+YW+LWGLPLFD++D SA++YE+ ECRR+NPEGY+KINAFDA+IGTESC MSF+VQRP +EPGFYLERTEV GRSIQYTI SY+ Q +PEG RY
Sbjct:    1 MRVTQGCFSFLPDLSDEQIKKQIEYAVNKGWAISIEWSDDPHPRNTYWELWGLPLFDIKDSSAVLYEITECRRVNPEGYMKINAFDASIGTESCVMSFIVQRPNEEPGFYLERTEVAGRSIQYTIKSYSTQTKPEGFRY 139          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: E8Z964_9PHAE (Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=2 Tax=Dictyopteris repens TaxID=218863 RepID=E8Z964_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 7.450e-82
Identity = 106/134 (79.10%), Postives = 125/134 (93.28%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARP 134
            +R+TQGCFSFLPDLTD+QI  QV YA+ KGWA+SIEWTDDPHPRNSYW+LWGLPLFD++D +A++YELN+CRR+NPEGYIKINAFDA+ GTESCA+SF+VQRP +EPGFYLER E+ GR+IQYTISSYAVQARP
Sbjct:    1 MRITQGCFSFLPDLTDEQITSQVNYAISKGWAISIEWTDDPHPRNSYWELWGLPLFDIKDSAAVLYELNQCRRVNPEGYIKINAFDASKGTESCALSFIVQRPTEEPGFYLERNEIHGRNIQYTISSYAVQARP 134          
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Match: J9QTR3_9STRA (Multifunctional fusion protein n=1 Tax=uncultured Pelagomonas TaxID=660917 RepID=J9QTR3_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.300e-77
Identity = 102/139 (73.38%), Postives = 121/139 (87.05%), Query Frame = 0
Query:    1 VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDLWGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMVQRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY 139
            +R+TQG FSFLPDLTD+QI KQVEYAM KGWA++IEWTDDPHPRN+YWD+WGLPLFD +D SA++YELNECR+LNPEGYIK+ AFDATIGTESC +SF+V RP  EPGF+L RTE  GR  +Y+ISSY+V A+P G RY
Sbjct:    1 MRITQGAFSFLPDLTDEQITKQVEYAMSKGWAINIEWTDDPHPRNTYWDMWGLPLFDCKDASAVMYELNECRKLNPEGYIKVQAFDATIGTESCVLSFIVNRPASEPGFFLARTEGPGRIQRYSISSYSVNAKPSGCRY 139          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1369.2807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7D7_ECTSI7.000e-8882.01Multifunctional fusion protein n=10 Tax=Phaeophyce... [more]
RBS_ECTSI1.410e-8781.29Ribulose bisphosphate carboxylase small subunit n=... [more]
A0A0R6LUN5_UNDPI2.850e-8782.73Multifunctional fusion protein n=44 Tax=Laminarial... [more]
A0A0S0GBG1_COSCS5.760e-8781.29Multifunctional fusion protein n=33 Tax=Phaeophyce... [more]
A0A2I4Q2E0_9PHAE8.180e-8780.58Multifunctional fusion protein n=11 Tax=Dictyopter... [more]
A0A7S6ZP87_9STRA1.590e-8477.70Multifunctional fusion protein n=3 Tax=Schizocladi... [more]
A0A1L2F1V1_9PHAE2.250e-8478.42Multifunctional fusion protein n=208 Tax=Fucales T... [more]
Q9GGQ1_VAULI1.850e-8376.98Multifunctional fusion protein n=2 Tax=PX clade Ta... [more]
E8Z964_9PHAE7.450e-8279.10Ribulose-1,5-bisphosphate carboxylase/oxygenase sm... [more]
J9QTR3_9STRA3.300e-7773.38Multifunctional fusion protein n=1 Tax=uncultured ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000894Ribulose bisphosphate carboxylase small chain, domainSMARTSM00961RuBisCO_small_2_acoord: 4..103
e-value: 5.1E-38
score: 142.3
IPR000894Ribulose bisphosphate carboxylase small chain, domainPFAMPF00101RuBisCO_smallcoord: 5..103
e-value: 1.4E-36
score: 124.4
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilyGENE3D3.30.190.10coord: 1..139
e-value: 2.9E-52
score: 178.1
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilySUPERFAMILY55239RuBisCO, small subunitcoord: 2..137
NoneNo IPR availablePANTHERPTHR31262FAMILY NOT NAMEDcoord: 7..104
NoneNo IPR availablePANTHERPTHR31262:SF0coord: 7..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1369contigL-elsbetiae_contig1369:10588..11007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1369.2807.1mRNA_L-elsbetiae_contig1369.2807.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1369 10588..11007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1369.2807.1 ID=prot_L-elsbetiae_contig1369.2807.1|Name=mRNA_L-elsbetiae_contig1369.2807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
VRLTQGCFSFLPDLTDDQIKKQVEYAMKKGWAVSIEWTDDPHPRNSYWDL
WGLPLFDLQDPSAIIYELNECRRLNPEGYIKINAFDATIGTESCAMSFMV
QRPVDEPGFYLERTEVEGRSIQYTISSYAVQARPEGDRY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000894RuBisCO_sc_dom
IPR036385RuBisCO_ssu_sf