prot_L-elsbetiae_contig13675.2794.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13675.2794.1
Unique Nameprot_L-elsbetiae_contig13675.2794.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length184
Homology
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 3.280e-98
Identity = 149/177 (84.18%), Postives = 159/177 (89.83%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            M+SASADASARMWDVQTGRELVVYNH GPVRSV+FAEGGQRFATVSDPFTDSPG ISVFE PDDVPTDQL+KIACLEIDLPPKMKATKVVWGALNEKLIV+YADGTIRTFDP+DGTELEYAQVG  +G  +         +H+KDI RLCINKDRTLLLTCSKDYT+KLLDANTL V
Sbjct:   67 MLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSG--------VHSKDINRLCINKDRTLLLTCSKDYTSKLLDANTLQV 235          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 2.910e-78
Identity = 129/159 (81.13%), Postives = 132/159 (83.02%), Query Frame = 0
Query:   19 RELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            RELVVYNH GPVRSVAFAEGGQRFATVSDPFTDSPG ISVFE PDDVPTDQL KIA LEIDLPPKMKAT VVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV                  H++DI RLCINKDRTLLLT SKDYT+KLLDANTL V
Sbjct:   85 RELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV------------------HSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQV 225          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 186 bits (471), Expect = 9.850e-55
Identity = 94/177 (53.11%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            ++SASADA+ R+WDVQTG  LV Y H GPVRSV +AEGGQ+F + S PF DSPGFIS+++TP DV   Q Q++A  EI +P K K T+V+W ALN++++ S+ DGTIR FDP  G  L  +                    H+K I+R+ ++ DRTLLLTCSKDYTAKLLDA+TL V
Sbjct:   67 LLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDPETGELLSTSTP------------------HSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEV 225          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.370e-33
Identity = 73/176 (41.48%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMK-----ATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLD 171
            ++SASAD + ++W +  G+ +  Y H GPVR VA+A GGQ FAT+SDPF + PG+ISVF  P     +Q  +   LEI+LP   K     AT VVW  LNE + V++ +G IR +DP +G ELE  Q                   H K I R+  N+++T+ +T S D+TAKL D
Sbjct:   67 LLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQP------------------HEKKINRVSFNRNKTMFITSSADFTAKLYD 224          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO)

HSP 1 Score: 130 bits (327), Expect = 2.970e-33
Identity = 76/175 (43.43%), Postives = 100/175 (57.14%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPP----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLD 171
            +++ASAD S R+WDV+TG  + V+NH GPVR VA+AEG Q F T+SDPF D P  I VF+ P+D           LEI+LP      +K T V W ALNE L+V++ +G IR +DP  G   E         EI           H K I RL  N+++TL +T S D+T+KL D
Sbjct:   67 LLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETGDLKE---------EITA---------HEKKINRLRFNREKTLFITSSADFTSKLYD 223          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A7S1TX14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX14_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.600e-32
Identity = 68/177 (38.42%), Postives = 106/177 (59.89%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            +++ASADA+ R+WDV+TGREL  Y H GPVR+VA+AEGG+ FAT ++PF   PG ++V+  P       L  I     ++PP+++A ++VW   N++L+++Y DG++   D   G EL+            CF +      HT  +  L  + D+T+++T S D +AKL+DA T  V
Sbjct:   95 LLTASADATVRLWDVRTGRELANYTHRGPVRAVAWAEGGEYFATAAEPFGRYPGQVAVYYCPAGAEEYDLLPIEGRMFEIPPEVRAAQLVWLNNNKELLIAYDDGSLHILDAEFGEELQ------------CFKY------HTAKVMDLQFSVDKTMIITASYDTSAKLIDATTFEV 253          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK)

HSP 1 Score: 123 bits (308), Expect = 1.540e-30
Identity = 69/177 (38.98%), Postives = 104/177 (58.76%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            ++S SADA+ +MWDV+TG E   +NH GPVRSV +AEG Q F +VSDPF +SP F+SV++ PDD   +Q++KI  LEI L  K       +   N++++V+  DG+IR +D   G ++   +                   HT+ I  +  NK+R+L+LT S D  +KL+D + + V
Sbjct:   67 LLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQL-DKKSTGGAHFIKENKEILVAMEDGSIRIYDAETGEQIHQVKH------------------HTQKIQTVFFNKERSLMLTGSADTWSKLIDLDNMEV 224          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A7R9YCC7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCC7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.310e-30
Identity = 67/177 (37.85%), Postives = 105/177 (59.32%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTLTV 177
            +++ASADA+ R+W+V+TGREL  Y+H+GPVR+VA+AEG Q FAT ++PF   PG I+V+  P D        I     ++PP+++A+++ W   N++++++Y DG++R  D   G EL    +                  H   I  +  + D+TLL+T S D ++KLLDA TL V
Sbjct:  105 LLTASADATVRLWEVRTGRELCQYDHSGPVRAVAWAEGCQYFATAAEPFGKHPGQIAVYYCPSDAEEYDQLPIENRVFEIPPEVRASQIAWLNNNKEILIAYDDGSLRILDAEYGDELHKFNI------------------HKHRIMDMQFSIDKTLLITASYDTSSKLLDATTLEV 263          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A7S3L4V7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4V7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 9.850e-27
Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPDDVPTDQLQKIACLEIDLPP----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLD 171
            +++ASAD + R+W+VQTG  +  + H GPVR V +AEG Q+F T++D F D P  ISV++ P+    +       L IDLP     ++  T V W A+NE ++V++ +G I+ +DP  G   E                      H K I R+  N D+TLL+T S D+T+KL D
Sbjct:   67 LLTASADTTCRLWNVQTGECIRHFTHTGPVRGVEWAEGSQKFVTINDSFMDHPPKISVYDVPEGQDPESYSDEPSLVIDLPKHATKRVAPTNVKWTAMNEDILVAFDNGMIKLYDPETGEMKEEFSA------------------HEKKINRVQFNIDKTLLITSSADFTSKLYD 223          
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Match: A0A1E7EXY2_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXY2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 5.920e-26
Identity = 62/180 (34.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFTDSPGFISVFETPD-DVPTDQLQKIACLEIDLPP----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLCINKDRTLLLTCSKDYTAKLLDANTL 175
            +++ASADA+ ++W++Q+G     + H GPVR VA++E  ++FAT+SDPF +    I++F+T + D  +D+      LEID+P     +++ T + W ALNE L++++ +G +R ++P  GT  E  +V                  H K I RL +N+ ++L +T S D+T+KL D   L
Sbjct:   67 LLTASADATVKLWNIQSGDLQHTFTHRGPVRGVAWSEDNKKFATISDPFVEHNAKITIFDTAELDGESDEDDLEPLLEIDVPKENSRRVQMTNISWTALNEHLLIAFDNGIVRLYNPTTGTIEEEIRV------------------HDKKINRLQLNQSKSLFITSSADFTSKLYDTANL 228          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13675.2794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIC2_ECTSI3.280e-9884.18Eukaryotic initiation factor eIF3 i subunit p36 n=... [more]
A0A6H5KMX5_9PHAE2.910e-7881.13Eukaryotic translation initiation factor 3 subunit... [more]
A0A835ZF13_9STRA9.850e-5553.11Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2NVM0_9STRA1.370e-3341.48Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5K121_FISSO2.970e-3343.43Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1TX14_9STRA1.600e-3238.42Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6V2RRW4_HETAK1.540e-3038.98Eukaryotic translation initiation factor 3 subunit... [more]
A0A7R9YCC7_9STRA5.310e-3037.85Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3L4V7_9STRA9.850e-2736.57Eukaryotic translation initiation factor 3 subunit... [more]
A0A1E7EXY2_9STRA5.920e-2634.44Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 69..111
e-value: 88.0
score: 4.7
coord: 126..171
e-value: 1.3
score: 16.4
coord: 17..60
e-value: 1.6
score: 15.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..23
score: 10.943
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..179
e-value: 7.3E-29
score: 103.0
NoneNo IPR availablePANTHERPTHR19877:SF1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Icoord: 1..177
NoneNo IPR availablePANTHERPTHR19877WD40 REPEAT PROTEINcoord: 1..177
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..23
score: 10.496
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13675contigL-elsbetiae_contig13675:770..4679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13675.2794.1mRNA_L-elsbetiae_contig13675.2794.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13675 770..4691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13675.2794.1 ID=prot_L-elsbetiae_contig13675.2794.1|Name=mRNA_L-elsbetiae_contig13675.2794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp
MISASADASARMWDVQTGRELVVYNHNGPVRSVAFAEGGQRFATVSDPFT
DSPGFISVFETPDDVPTDQLQKIACLEIDLPPKMKATKVVWGALNEKLIV
SYADGTIRTFDPYDGTELEYAQVGGGRGEIACFHWGPPGLIHTKDIARLC
INKDRTLLLTCSKDYTAKLLDANTLTVSVWCVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf