prot_L-elsbetiae_contig1367.2792.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1367.2792.1
Unique Nameprot_L-elsbetiae_contig1367.2792.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length395
Homology
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BLAST of mRNA_L-elsbetiae_contig1367.2792.1 vs. uniprot
Match: D7FTX7_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX7_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 2.600e-71
Identity = 230/410 (56.10%), Postives = 267/410 (65.12%), Query Frame = 0 
Query:    1 MGAVLAGTCGPRNREDQVFRAAEC------EPLPDLDAWVNHSTTPDLPAIVADMHRNSSRESWLKFLGSGLLEASSDGNLLAVKQLLAGGAPRHARDAEGRTPLHRASIAGHAHVVGFLLHEEGDXXXXXXXXXXXXXXXX----PRLVWQASKEGPVLVPSVSLQKRVTVDARDDLRSCPAHLAAARGHAHVVRLLVQHGADVSSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEATTTISGXXXXXXXXXXXXXXXXXXXXXXXXS-EMAVDTDERTPRAMVGERVSDEERVVDPGCSEREERIHRLLDDAPKDRLWRRRXXXPLXXXXXXXPAYDDS-----ALDDGLDRPLAGVLAGLQEGIVRIIVSYL 394
            MGA L G+CG R +E      +EC      E  P+LDAW++HST P L +IV + ++ SSRE W KFLG+GLL+A+SDGNL  V+QLLA GAP HARD EG TPLHRAS+AGHA V   LL   GD                    P L WQAS EGPVLVPSVSL KR T+DARD   SCP HLAAA GHA VV++L+QHGADVS  N                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX+ E AVD D+ TP  MV ER+++E++  DP  +   E I R+L DAP+DRLWRRR   PL       PA+D        +D G  + +  ++   +EGI+R IVSYL
Sbjct:    1 MGAALGGSCGGRTKE---VAGSECDGPPPGEQPPELDAWIDHSTWPGLRSIVTEAYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLHARDLEGHTPLHRASVAGHAGVAEQLL-SSGDGRAPPLGGASPSSSGMVPEPPSLKWQASMEGPVLVPSVSLVKRTTLDARDHSGSCPIHLAAACGHADVVQVLLQHGADVSGSNGVAQSPLHTAAAGLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADERAVDIDDLTPENMVCERMTEEQKAADPTIAPVGETICRMLADAPQDRLWRRRRLLPLLHWRQPPPAFDTGPGTAVTVDAGSGQSIFELVVCEEEGIMRNIVSYL 406
[Close]
BLAST of mRNA_L-elsbetiae_contig1367.2792.1 vs. uniprot
Match: A0A813LKL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LKL6_POLGL)

HSP 1 Score: 60.8 bits (146), Expect = 1.030e-6
Identity = 46/129 (35.66%), Postives = 60/129 (46.51%), Query Frame = 0 
Query:   66 LLEASSDGNLLAVKQLLAGGAPRHARDAEGRTPLHRASIAGHAHVVGFLLHEEGDXXXXXXXXXXXXXXXXPRLVWQASKEGPVLVPSVSLQKRVTVDARDDLRSCPAHLAAARGHAHVVRLLVQHGAD 194
            L +AS  G+   V++LL+  A  +  D +GR PLH A+ AG   V+  LL    D                    WQ   E   L+    L  R  V+A D+    P   AA++GHA VVRLLVQ GAD
Sbjct:   59 LTDASMSGDQARVQELLSENADPNMSDEQGRLPLHAATFAGATAVLSSLLDARADANLREQGDGNRSLQIA---AWQGHLEATELL----LDNRADVEAVDERGWSPLCSAASQGHASVVRLLVQKGAD 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1367.2792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX7_ECTSI2.600e-7156.10Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX7... [more]
A0A813LKL6_POLGL1.030e-635.66Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 184..198
score: 38.69
coord: 95..110
score: 41.52
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 168..197
e-value: 0.22
score: 20.6
coord: 268..298
e-value: 0.0017
score: 27.6
coord: 234..263
e-value: 0.19
score: 20.8
coord: 94..123
e-value: 0.4
score: 19.7
coord: 201..230
e-value: 1.8
score: 17.6
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 95..116
e-value: 0.0012
score: 19.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 168..200
score: 11.594
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 201..233
score: 10.793
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 268..300
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 234..266
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 94..120
score: 9.725
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 174..263
e-value: 7.6E-15
score: 55.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 64..305
score: 50.507
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 149..329
e-value: 3.5E-41
score: 142.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 47..122
e-value: 6.1E-11
score: 44.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 64..308
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 203..305
coord: 66..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1367contigL-elsbetiae_contig1367:22846..24294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1367.2792.1mRNA_L-elsbetiae_contig1367.2792.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1367 21333..24691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1367.2792.1 ID=prot_L-elsbetiae_contig1367.2792.1|Name=mRNA_L-elsbetiae_contig1367.2792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp
MGAVLAGTCGPRNREDQVFRAAECEPLPDLDAWVNHSTTPDLPAIVADMH
RNSSRESWLKFLGSGLLEASSDGNLLAVKQLLAGGAPRHARDAEGRTPLH
RASIAGHAHVVGFLLHEEGDDESPPPGASPAGVPPPPRLVWQASKEGPVL
VPSVSLQKRVTVDARDDLRSCPAHLAAARGHAHVVRLLVQHGADVSSVNG
LLQTPLHAAAAGGSSESMHVLLGAGGDVMARDNAGRAPLHVAASLGHPSA
VSTLVEGGADTEATTTISGRTALHEACASLRPETVKQLLDRGASEMAVDT
DERTPRAMVGERVSDEERVVDPGCSEREERIHRLLDDAPKDRLWRRRRLL
PLLLRRQPPPAYDDSALDDGLDRPLAGVLAGLQEGIVRIIVSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf