prot_L-elsbetiae_contig1367.2791.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1367.2791.1
Unique Nameprot_L-elsbetiae_contig1367.2791.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length906
Homology
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: D7FTY5_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.140e-53
Identity = 153/391 (39.13%), Postives = 202/391 (51.66%), Query Frame = 0
Query:  505 APQPTLVLNRATGGEGWLAGRDVYC-QEASATTGSARGDNRSKPKRGRDEE-PTADL------PSSAPATQGYFPGQLTSSFADPMGMGGRMAGRGPEPLSKKTKATLSESSPSQSLVATRNRFKIVHHHAIPPQGQLPLGTRGQGPHPGPP----GGGERYATNXXXXXXXXXXXXXXXXARIEP--FHSPGVPHGLITFPPKASPSWAAASKTRVGSTLSVVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQRVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPETPLARMLTQEASAKMAGKEASRTTTGR 881
            AP  T+  N      GW+A    +  Q AS T  +  G   S+PKR R+EE  TA++      PS AP  Q     Q   +  + + M  RMA  G   + KK K+TL  S   ++L+ATR RF+I+HHHA+P Q QL L          PP      G   AT                   I+P  + +P  P          SP               VVIDG++ A ++ +T   WS + P+LAIQFF+ERGV CVAFLPR+RV  ++P   FY AF  AR   AI+ +P GAN+ LFI+KHA++  A+VVTN  L     +  TLA+LGQT  EL +YLSR HV +TFA D+F PDPE PL +M  ++AS   A +    TT GR
Sbjct:  459 APAATVKSNHRAPKNGWVAAVGAFHGQGASKTVWAGGGSGPSRPKRNREEELTTAEITTRLRDPSKAPGQQ-----QQQQTPDEMIDMVRRMASMGVATVPKKKKSTLDASREPKALIATRARFRIIHHHALPSQQQLVLYK--------PPTFNIASGRSGATRSNQSSWVPPPRAPLA---IKPSTWTTPKQPXXXXXXXXXXSPL--------------VVIDGTDIALTYWRTDDRWSALQPLLAIQFFKERGVPCVAFLPRERVYGVTPQDDFYTAFHEARSRRAISEIPQGANASLFILKHAIENNAYVVTNAQLSGHIASPATLASLGQTKNELHSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQASG--ANQTRGNTTRGR 817          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: A0A6H5KK30_9PHAE (RNase NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK30_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 5.880e-53
Identity = 144/368 (39.13%), Postives = 188/368 (51.09%), Query Frame = 0
Query:  506 PQPTLVLNRATGGEGWLAGRDVYCQEASATTGSARGDNRSKPKRGRDEEPTADLPSSAPATQGYFPGQLTSSFADPMGMGGRMAGRGPEPLSKKTKATLSESSPSQSLVATRNRFKIVHHHAIPPQGQLPLGTRGQGPHPGPPGGGERYATNXXXXXXXXXXXXXXXXARIEPFHSPGVPHGLITFPPKAS---PSWAAASKTRVGSTLS---VVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQRVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPETPLARMLTQEASA 867
            P  T+ LN A      +A      QE + T G   G  +S+PKRGR+EEP  D   SA   +G   G+  S     + +  R A    +P +KK K  LS+SSP ++LVATR RF+IVHHH  P Q Q  L                                     +++   ++ G   G  T   K S   P   AA  +R   + +   VVIDG++ A  HR   G WS  G +LAIQFFE RGV CVAFLPR+R+  +SP  G   AF  AR  GAI  +P G  + L I+K+A++ K  VVTN  L   A +NE LA LGQT  +LR YLS +HV +TF R++F P+PETP  RML  +A A
Sbjct:  486 PAGTVGLNGAPERGLLMADPSSQHQELATTAGEECGGEQSRPKRGREEEPGMDSTGSASRARGGASGRQPSGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVHHHDAPKQQQQQL---------------------------------VAHRSKLPTLNTAGEARG--TSKSKGSSRVPLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGAHGQWSAQGALLAIQFFERRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAINEIPRGEKADLSILKYAIESKVHVVTNKKLSTHATSNEALAFLGQTKQDLREYLSHYHVCYTFVRNDFKPNPETPFIRMLLNQAPA 818          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: A0A6H5KJR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.800e-36
Identity = 154/513 (30.02%), Postives = 206/513 (40.16%), Query Frame = 0
Query:  482 TATSECSVP-PSKIETAPGREPDAAPQP--TLVLNRATGGEGWLAGRDVYC-QEASATTGSARGDNRSKPKRGRDEEPTADL-------PSSAPATQGYFPGQLTSSFADPMGMGGRMAGRGPEPLSKKTKATLSESSPSQ-------------------------------------------------------------SLVATRNRFKIVHHHAIPPQGQLPLGTRGQGPHPGPPGGGERYATNXXXXXXXXXXXXXXXXARIEPFHSPGVPHGLITFPPKASPSWAAASKTRVGSTLSVVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQRVESISPHSG--------------------------------------------------------FYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPETPLARMLTQEAS 866
            T+T++ + P P+K+E++ G    A P P  T   N      GW+A    +  QEAS T  +  G   S+PKR R+EE T          PS AP  Q     Q   +  + M M  RMA  G   + KK K TL  SS  +                                                             +L+ATR RF+I+HHHA+P Q QL L      P       G   AT                        S   P        K S +W          +  VV+DG++ A ++ +T   WS + P+LAIQFF+E GV CVAFLPR+RV S++   G                                                        FY AF  AR   AI+ +P GAN+ LFI+K A++  A+VVTN  L     +  TLA+LGQT  EL++YLSR HV +TFA D+F PDPE PL +M  ++AS
Sbjct:  333 TSTTQSAWPSPAKLESSDGNAIIAGPAPAATAESNHRATEHGWVAAVGAFHGQEASTTAWAGSGSGPSRPKRNREEELTTTEITTRLRNPSKAPGQQ-----QKQQTPDEMMDMVRRMASMGIATVPKKKKLTLDASSEPKVIFNIKLNNRAVARVRVLSFTPAVVLAYPVEHHNTLWVRLPNGGNPDGCGCCAGARNKKIVALIATRARFRIIHHHALPSQQQLVL----YDPPTSNIASGRSGATRSN--------------------QSSWGPPARAPLAIKPS-TWTTPKPXXXXXSPLVVLDGTDIALTYWRTDDRWSALQPLLAIQFFKEWGVPCVAFLPRERVCSVTLQDGGSPTSFEGGFLRSDLVHKDMRRPVVGVRAGSYSLLTFGMPRPNPFNPVGSSPLVTDFYTAFHEARSRRAISEIPQGANASLFILKRAIEHNAYVVTNAKLSGHIASPATLASLGQTKNELQSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQAS 815          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: D7FTX8_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 3.600e-36
Identity = 121/335 (36.12%), Postives = 159/335 (47.46%), Query Frame = 0
Query:  506 PQPTLVLNRATGGEGWLAGRDVYCQEASATTGSARGDNRSKPKRGRDEEPTADLPSSAPATQGYFPGQLTSSFADPMGMGG------RMAGRGPEPLSKKTKATLSESSPS-------------QSLVATRNRFKIVHHHAIPPQGQLPLGTRGQGPHPGPPGGGERYATNXXXXXXXXXXXXXXXXARIEPFHSPGVPHGLITFPPKASPSWAAASKTRVGSTLSVVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQRVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETL 821
            P  T+ LN A      +A      QE + T G  RG  +S+PKRGR+EEP      S    +G   G+       P G+GG      R A    +P +KK K  LS+SSP              Q+LVATR RF+IVHHH  P Q Q  +  R + P     G   R + +                       +P     L + P +++            +   VVIDG++ A  HR   G WS  GP+LAIQFFE+RGV CVAFLPR+R+  +SP  G   AF  AR  GAI+ +P G    LFI+K+A++ K  VVTN  L   A +NETL
Sbjct:  486 PAGTVDLNGAPERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMASTGSVSRARGGESGR------QPAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKFSASVPRTALSLQNLVATRARFQIVHHHDAPKQQQQLVAHRSKLPTLNTAGEARRTSKSKGSS------------------RAPLAGAALSSRPSRST------------TPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFEQRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKGDLFILKYAIESKVHVVTNKRLSTHAASNETL 784          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: D7FNE3_ECTSI (Similar to zinc finger CCCH-type containing 12C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE3_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 9.660e-35
Identity = 82/170 (48.24%), Postives = 110/170 (64.71%), Query Frame = 0
Query:  708 GSTLSVVIDGSEAAFSHRQTSGG---WSDVGPMLAIQFFEERGVDCVAFLPRQRVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPETPLARMLTQEASAKMAGKEA 874
            G+TL V IDGS  AF+    S G   WS  GP  AIQFF+ RG+ CV F+P  R+ +++ +   YP F  A  SG I  VP   N  LFI+++A+ KKA+VV+ND   D A +++TLAALG   AEL+A+L++H V +TFAR EF+PDPE  L RM+TQ+ + K    EA
Sbjct:  395 GTTL-VAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILRYAIGKKAYVVSNDQFRDHARSSQTLAALGLNAAELQAFLAQHQVCYTFARAEFIPDPEANLIRMITQQEAEKRREMEA 563          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: A0A8J4PVQ7_9MYCE (RNase NYN domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVQ7_9MYCE)

HSP 1 Score: 60.1 bits (144), Expect = 2.060e-5
Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 0
Query:  713 VVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQ---RVESISPHSGF-----------YPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPE 854
            +VIDG   A  +  T   +S +G   A+ ++++RG + VAF+P     R     P   F             AF +   SG ++  P      ++ + +A    A +VTND  +D+    +          ++R ++  H +SFTF RDEF+P+P+
Sbjct:  764 IVIDGPNVAKKYG-TKKKFSVMGLKKALDYYDQRGYEVVAFVPESYASRKNHHDPKKNFTLFEYQDVADDLVAFQKLTESGKVSLTPAQDYDDIYTIHYARMHNACIVTNDRYNDIIDKCQE-----SEKQKIRKFIRDHCISFTFVRDEFLPNPD 913          
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Match: UPI000644C6F7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C6F7)

HSP 1 Score: 58.2 bits (139), Expect = 7.660e-5
Identity = 49/188 (26.06%), Postives = 79/188 (42.02%), Query Frame = 0
Query:  682 PGVP--HGLITFPPKASPSWAAASKTRVGSTLSVVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDCVAFLPRQ-------------RVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALDKKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFVPDPE 854
            P VP   GLI  P  +    A   K++   +  +VIDG   A  +   S  +S +    AI+++ +RG + + F+P               R+    P       F      G +   P       + +++A    A +VTND  +D     ET A   +     R ++  H +SFTFAR EF+P+P+
Sbjct:  620 PPVPGARGLIEVPSDS----AVFQKSKKNRSPMIVIDGPNVALKYGN-SKTFSVLAIKKAIEYYSQRGFEVITFVPEHVATRKPSGPNAPMRITDFQPFVDDMKMFNELVEKGLVCMTPPQDYDDSYAIQYAKKHGAMIVTNDRYNDHINKQETEAERQKA----RRFIREHCISFTFARHEFLPNPD 798          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1367.2791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FTY5_ECTSI1.140e-5339.13RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KK30_9PHAE5.880e-5339.13RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJR8_9PHAE1.800e-3630.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTX8_ECTSI3.600e-3636.12RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
D7FNE3_ECTSI9.660e-3548.24Similar to zinc finger CCCH-type containing 12C n=... [more]
A0A8J4PVQ7_9MYCE2.060e-526.92RNase NYN domain-containing protein n=1 Tax=Polysp... [more]
UPI000644C6F77.660e-526.06hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 439..466
NoneNo IPR availableGENE3D3.40.50.11980coord: 711..865
e-value: 3.0E-18
score: 68.0
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 712..859
e-value: 6.0E-8
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1367contigL-elsbetiae_contig1367:12940..19653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1367.2791.1mRNA_L-elsbetiae_contig1367.2791.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1367 12666..20275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1367.2791.1 ID=prot_L-elsbetiae_contig1367.2791.1|Name=mRNA_L-elsbetiae_contig1367.2791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=906bp
MDQASGTGVAASSSASAHRAASPGAEPMDQDEQILSAFSKLRLHTPTDPQ
REPASAVDTYSFGPGGPGRTSPSTIPRLAAGRGRGRTLPAWMMSGEHAVP
GGLRESSARAEPTGLPSPPPQHDLQGGQQPDPTADTSFQVGVRKKGKNKS
KKKKQQNTAETSSKNSTGGADVHGSARAAPARQCGPAPASEPSTGIWMEG
PPSAARSPQAGPRLAAGSDLGTILQAAVARGPVLVQGGLQERAPLGSAGA
AQPQMSRPTGSYPSRPQQNTPLSGQRASSPTNGGKRMKHINELHDNQAAA
GGGTRGGVSSARPPSTAPPAMAASNRAPDAGVSVAGVGRGRQRTLPAWMT
SGAVPGGLQQQLPHGGDAWAQVPRATALNSPSAAAAAAATATTTAAAAAA
EVAATTKTTTTTTTTAAAAATAAGAAAAQQIDHDDESIQNNSNEAKKKLT
KKKKKQQQQQQQQRHATTCGGSVDASGGRSETATSECSVPPSKIETAPGR
EPDAAPQPTLVLNRATGGEGWLAGRDVYCQEASATTGSARGDNRSKPKRG
RDEEPTADLPSSAPATQGYFPGQLTSSFADPMGMGGRMAGRGPEPLSKKT
KATLSESSPSQSLVATRNRFKIVHHHAIPPQGQLPLGTRGQGPHPGPPGG
GERYATNTNTSTNTNTNANANTNARIEPFHSPGVPHGLITFPPKASPSWA
AASKTRVGSTLSVVIDGSEAAFSHRQTSGGWSDVGPMLAIQFFEERGVDC
VAFLPRQRVESISPHSGFYPAFLRARGSGAIASVPVGANSRLFIVKHALD
KKAFVVTNDWLHDVAGNNETLAALGQTGAELRAYLSRHHVSFTFARDEFV
PDPETPLARMLTQEASAKMAGKEASRTTTGRGYAYAAGLPSAAPPPAYPE
RYRLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN