prot_L-elsbetiae_contig1366.2785.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1366.2785.1
Unique Nameprot_L-elsbetiae_contig1366.2785.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length540
Homology
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BLAST of mRNA_L-elsbetiae_contig1366.2785.1 vs. uniprot
Match: A0A6H5K507_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K507_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.140e-34
Identity = 168/474 (35.44%), Postives = 211/474 (44.51%), Query Frame = 0 
Query:   99 GASARNDRTGSASSPRQILVKVPCVSTSNGXXXXXXXXXXXXXGVPYRLAWNHEVRKG--------------------------SGATGVCSSAVDSSEENSVVQGDAGSFRPNDKAPGVETAAVAVAAVEAKRHGRPNAAGAGIMVQLPRPAEGDRVSSTTPGDNSGFGCALFSASDSEPKQXXXXXXXRLVVEENRPSTSRVIANLRASVACDVRPSSASAYSSSFFSTAPVLTELAGSGAL-PVSNPGQMQWGVSIPGRTALSPDVR---PYDDHEDGLVRPNEQSRPQSAAASSVASRLSLASGGAGGEGRRHGATATSAKKVTTSVNLFEHDAVCGKAVAATRRQPLDRKRGGTANRVG-NQQQNSSRRPKPAA-GTSSAERRGRAMRAPTGYSFFPSSPPAVENVAGRDLPFDG-GHAQPFSPGEPMKGGVSEWEGPSSFYSDAADEARGMAGYALDSPGTWREAVGY 539
            G   R +R G+ SSPRQILVKVPCV TS                 PYRLAWN EV                              GA G C      + +++  +GDA            +  A A A + +   GR N     +MVQLPRP EGD  SSTTPG   G G  + +   S             ++EE RP+TSRVIA LRASVA +    S +A        AP  T  AG   L P++         +IPGR   S   R   P+D H+   V    + RPQSAA  S+A++ S   G      + HG  +   +            A  G A AA  R      RG TA +   N Q  +SRRP+ A  G +  +RR R ++A   YSFFPS+    EN AG +  +D  G       G  + G VSEWE  +S  S    EA   AGYALDSPGTWREAVG+
Sbjct:   54 GEVVRGNR-GAPSSPRQILVKVPCVETSR-TACGDAEKKCKRGSAPYRLAWNDEVTTAVAYADNPYVDARNTAHGHDDGKALAEDGAGGCCHGGGQVANKSAKGKGDA--------TRAADATAAAAAGLVSPAPGRNNMTA--VMVQLPRPLEGDEASSTTPGGR-GVGFDVGNGRGSNSVLSASDSGRLSLLEEARPTTSRVIAKLRASVAREACQGSTAA------KLAPGATAAAGPACLLPLTVLEVRPGDAAIPGRRPPSSPGRRAGPHDGHKRS-VGTRGRPRPQSAAGLSLAAQTSRRIGV-----QHHGTASAGGRTRENRRGFVNAAATLGPAAAAITR------RGATACKTDENVQGANSRRPQSAGPGENIGDRRRRDVKAQDNYSFFPSASSTGEN-AGTECGYDEMGVRMILGGGVMLPGDVSEWE--ASLCSST--EATSRAGYALDSPGTWREAVGF 491
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1366.2785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K507_9PHAE1.140e-3435.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1366contigL-elsbetiae_contig1366:11701..13595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1366.2785.1mRNA_L-elsbetiae_contig1366.2785.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1366 11701..13595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1366.2785.1 ID=prot_L-elsbetiae_contig1366.2785.1|Name=mRNA_L-elsbetiae_contig1366.2785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=540bp
EDRRTIAPARPHSAAGGMGRRSGGGVQLAGAGKTWSREISERTAPPRPTS
APGGGKSHPAQGEEGLGRGGCVRQTISRRGQRRGSRDGQVRVLATWSYGA
SARNDRTGSASSPRQILVKVPCVSTSNGGGGGATKSKRRGGGVPYRLAWN
HEVRKGSGATGVCSSAVDSSEENSVVQGDAGSFRPNDKAPGVETAAVAVA
AVEAKRHGRPNAAGAGIMVQLPRPAEGDRVSSTTPGDNSGFGCALFSASD
SEPKQQQQQQQHRLVVEENRPSTSRVIANLRASVACDVRPSSASAYSSSF
FSTAPVLTELAGSGALPVSNPGQMQWGVSIPGRTALSPDVRPYDDHEDGL
VRPNEQSRPQSAAASSVASRLSLASGGAGGEGRRHGATATSAKKVTTSVN
LFEHDAVCGKAVAATRRQPLDRKRGGTANRVGNQQQNSSRRPKPAAGTSS
AERRGRAMRAPTGYSFFPSSPPAVENVAGRDLPFDGGHAQPFSPGEPMKG
GVSEWEGPSSFYSDAADEARGMAGYALDSPGTWREAVGY*
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