prot_L-elsbetiae_contig13654.2779.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13654.2779.1
Unique Nameprot_L-elsbetiae_contig13654.2779.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: D8LQB9_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB9_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.200e-56
Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0
Query:    2 QVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            +VLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNA LHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQ+
Sbjct:  410 KVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNATLHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQL 519          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.390e-55
Identity = 98/110 (89.09%), Postives = 101/110 (91.82%), Query Frame = 0
Query:    2 QVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            +VLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNA LH LV       FSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFV+STVTSRDLFNTLQ+
Sbjct:  986 KVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNATLHCLVHRLMHKVFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVISTVTSRDLFNTLQL 1095          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A7R9U2H8_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2H8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.860e-30
Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 0
Query:    2 QVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            ++LV+ WL E +  GN  AD++L+HFYRW+CA +S L++ ALH++V       F RL+AELRRLGA VV+ASF +++IAT K+DV +A++Y  FVV T+T+  +F+ LQ+
Sbjct:  106 RLLVSQWLAEASMNGNEIADAMLMHFYRWLCAAESKLYDPALHQMVHQLMTKVFLRLVAELRRLGAHVVYASFNRILIATQKTDVASAQEYVSFVVETITAMPVFSILQL 215          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A7S2MG59_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG59_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.240e-28
Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    2 QVLVTTWLDEVTHMGNAH-----ADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQ--KVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            + LV  WL+E+T  G+       AD LLVHFYRW+C+R+SLL++ AL R+V       F RL++E+RRLGA VVFA+ Q  +++I TNK+D KAARDY  F++ T+TS D+F  + +
Sbjct:  152 KTLVNQWLNEMTRKGSTKDSREVADDLLVHFYRWLCSRESLLYDPALKRVVCMLMKKIFLRLVSEIRRLGAEVVFANPQGGRIVIMTNKTDPKAARDYVNFIIETITSHDVFTHMAI 268          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.320e-26
Identity = 53/110 (48.18%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    2 QVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            +VLV TW+ EV  +G+  AD+L  +F+RW+C   SL ++ AL RL        F RL+AE+RRLGA V+FA+ Q+++IATNK D+ +A +YA FV+ TV SR +F+ LQ+
Sbjct: 1842 RVLVETWMGEVERVGSLQADALATNFWRWMCDADSLFYDPALRRLCLMLINKYFHRLVAEMRRLGAQVIFANAQRIMIATNKEDMASAHEYASFVLRTVLSRRIFSRLQI 1951          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A2G9GVA6_9LAMI (DNA polymerase epsilon catalytic subunit n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVA6_9LAMI)

HSP 1 Score: 107 bits (266), Expect = 1.280e-24
Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    4 LVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            L+   L +V   GN  AD++L H YRWIC+ +S LH+ ALHR++       F+ LIAELR+LGA +VFASF KVII T KSD+ AA+ Y + V+ T+ +RDLF+ +++
Sbjct:  624 LIQRCLADVITSGNVFADTILQHLYRWICSPKSKLHDPALHRMLHKVMQKIFALLIAELRKLGATIVFASFGKVIIDTGKSDISAAKAYCESVLKTLHTRDLFDLIEL 731          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A8M8V0N1_SESIN (DNA polymerase epsilon catalytic subunit A n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8V0N1_SESIN)

HSP 1 Score: 104 bits (260), Expect = 8.460e-24
Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 KQVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            KQ++     D VT  GN  AD++L H YRW+C+ +S LH+ ALHR++       F+ L+AELR+LGA +VF+SF++VII T KSD+ AA+ Y + VV T+ SRDLF  +++
Sbjct: 1761 KQLIQRCLADAVTS-GNVFADAILQHLYRWLCSPRSKLHDPALHRMLHKVMQKVFALLMAELRKLGATIVFSSFRRVIIDTGKSDLPAAKAYCESVVKTLQSRDLFEWIEL 1870          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A2I0JBN5_PUNGR (DNA polymerase epsilon catalytic subunit n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JBN5_PUNGR)

HSP 1 Score: 104 bits (259), Expect = 1.130e-23
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 KQVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            KQ++     D VT  GN +AD+LL H YRW+C+ +S LH+ ALHR++       F+ L+AELR+LGA ++FA+F KVII T K D+ AAR Y+  +V T+ +RDLF  +++
Sbjct:  687 KQLIQRCLADAVTS-GNIYADALLQHLYRWLCSPKSKLHDPALHRMLHKVMQKVFALLLAELRKLGASIIFANFSKVIIDTGKYDISAARAYSDSLVKTLQNRDLFEWIEL 796          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A218WMH4_PUNGR (DNA polymerase epsilon catalytic subunit n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218WMH4_PUNGR)

HSP 1 Score: 104 bits (259), Expect = 1.150e-23
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 KQVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            KQ++     D VT  GN +AD+LL H YRW+C+ +S LH+ ALHR++       F+ L+AELR+LGA ++FA+F KVII T K D+ AAR Y+  +V T+ +RDLF  +++
Sbjct: 1717 KQLIQRCLADAVTS-GNIYADALLQHLYRWLCSPKSKLHDPALHRMLHKVMQKVFALLLAELRKLGASIIFANFSKVIIDTGKYDISAARAYSDSLVKTLQNRDLFEWIEL 1826          
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Match: A0A6P8CK98_PUNGR (DNA polymerase epsilon catalytic subunit n=1 Tax=Punica granatum TaxID=22663 RepID=A0A6P8CK98_PUNGR)

HSP 1 Score: 104 bits (259), Expect = 1.150e-23
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 KQVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQV 111
            KQ++     D VT  GN +AD+LL H YRW+C+ +S LH+ ALHR++       F+ L+AELR+LGA ++FA+F KVII T K D+ AAR Y+  +V T+ +RDLF  +++
Sbjct: 1772 KQLIQRCLADAVTS-GNIYADALLQHLYRWLCSPKSKLHDPALHRMLHKVMQKVFALLLAELRKLGASIIFANFSKVIIDTGKYDISAARAYSDSLVKTLQNRDLFEWIEL 1881          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13654.2779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB9_ECTSI1.200e-5697.27DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5J9K7_9PHAE2.390e-5589.09DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A7R9U2H8_9STRA1.860e-3050.00DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S2MG59_9STRA3.240e-2848.72DNA polymerase epsilon catalytic subunit (Fragment... [more]
W7TVX1_9STRA4.320e-2648.18DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A2G9GVA6_9LAMI1.280e-2449.07DNA polymerase epsilon catalytic subunit n=1 Tax=H... [more]
A0A8M8V0N1_SESIN8.460e-2447.75DNA polymerase epsilon catalytic subunit A n=1 Tax... [more]
A0A2I0JBN5_PUNGR1.130e-2346.85DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]
A0A218WMH4_PUNGR1.150e-2346.85DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]
A0A6P8CK98_PUNGR1.150e-2346.85DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalSMARTSM01159DUF1744_2coord: 1..113
e-value: 0.0016
score: -168.1
IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalPFAMPF08490DUF1744coord: 4..110
e-value: 4.4E-37
score: 127.6
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 4..110
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 4..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13654contigL-elsbetiae_contig13654:3312..4388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13654.2779.1mRNA_L-elsbetiae_contig13654.2779.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13654 3312..4388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13654.2779.1 ID=prot_L-elsbetiae_contig13654.2779.1|Name=mRNA_L-elsbetiae_contig13654.2779.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
KQVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNAALHRLVHRL
MHKVFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTV
TSRDLFNTLQVFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013697DNA_pol_e_suA_C
IPR029703POL2