prot_L-elsbetiae_contig13640.2770.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13640.2770.1
Unique Nameprot_L-elsbetiae_contig13640.2770.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length123
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.010e-72
Identity = 114/122 (93.44%), Postives = 121/122 (99.18%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIKK 122
            MSGKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK+GKYA+R GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT+KK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 3.480e-71
Identity = 113/121 (93.39%), Postives = 120/121 (99.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIK 121
            MSGKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK+GKYA+R GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT+K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 8.630e-70
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 4.470e-69
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.410e-67
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKK TSRS+KAGLQFPVGRIGRF+KQGKY++R G GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.510e-64
Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIK 121
            MSGKGKGGRG KK+T+ S+KAGLQFPVGRIGR+L+QGKYATR GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 199 bits (505), Expect = 8.880e-64
Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGKGGRG---KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            M+GKGKGGRG   KK+TS+SSKAGLQFPV R+GRFLK G+YA R GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKT
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT 122
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 199 bits (505), Expect = 1.040e-63
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 0 
Query:    3 GKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIKK 122
            GKGK   GKKA SRS+KAGLQFPVGR+ R+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RI+PRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ KK
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 199 bits (505), Expect = 1.190e-63
Identity = 104/121 (85.95%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    3 GKGKGGRG--KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIK 121
            GKGKGGRG  K+ TS SSKAGLQFPVGRIGR+L+QGKYATR GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKTIK
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKKTIK 130
[Close]
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.270e-63
Identity = 104/121 (85.95%), Postives = 114/121 (94.21%), Query Frame = 0 
Query:    3 GKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTIKK 122
            GKGKGGRG KKA S+S+KAGLQFPVGR+GRFLKQG+YA R GAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKKT  K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13640.2770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.010e-7293.44Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.480e-7193.39Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE8.630e-7094.12Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI4.470e-6994.12Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI1.410e-6789.83Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6U2JFS4_9STRA3.510e-6486.07Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A836CG77_9STRA8.880e-6486.07Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A061QUG5_9CHLO1.040e-6385.83Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
B7FZS7_PHATC1.190e-6385.95Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=... [more]
A0A835ZLE9_9STRA1.270e-6385.95Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 72.8
coord: 56..69
score: 90.54
coord: 41..56
score: 85.83
coord: 98..116
score: 76.04
coord: 70..84
score: 77.52
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 7.2E-78
score: 274.7
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..122
e-value: 2.0E-61
score: 207.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 9.7E-15
score: 55.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 2.7E-19
score: 68.6
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..120
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..120
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13640contigL-elsbetiae_contig13640:6..374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13640.2770.1mRNA_L-elsbetiae_contig13640.2770.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13640 6..374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13640.2770.1 ID=prot_L-elsbetiae_contig13640.2770.1|Name=mRNA_L-elsbetiae_contig13640.2770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp
MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKTIKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS