prot_L-elsbetiae_contig13639.2768.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13639.2768.1
Unique Nameprot_L-elsbetiae_contig13639.2768.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Match: D7G0U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U4_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.670e-30
Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 0
Query:   62 DAQPEKYMDGAAWRNFLADG-KGE-WFARWNAMAQPRINQLAAIAESEREGGGGAG--------PFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPA 149
            DAQPEKYM GA W+NFL+ G  G+ WF RWN+MAQPRI+++AA+AE+ER GG  +         PFRVA+VGDSTMMQQHGV+CAFL ER G  FD A
Sbjct:  167 DAQPEKYMSGARWKNFLSSGVSGDTWFTRWNSMAQPRIDKVAALAEAERNGGDASXXXXXXTQQPFRVAMVGDSTMMQQHGVICAFLAERAGSLFDAA 264          
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Match: A0A6H5JXH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH8_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 4.700e-30
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   62 DAQPEKYMDGAAWRNFLADGKG--EWFARWNAMAQPRINQLAAIAESEREGG-----GGAG---PFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPA 149
            DAQ +KYM GA W+NFL  G G   WF RWNAM QPRI++LAA+AE+ER  G     GG G   PFRVA++GDSTMMQQHGV+CAFL ER G  FD A
Sbjct:   89 DAQSDKYMSGAQWKNFLESGVGGDTWFTRWNAMVQPRIDKLAALAETERNWGDASSSGGRGTQQPFRVAMIGDSTMMQQHGVICAFLAERAGSLFDAA 186          
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Match: D7FKK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 7.950e-16
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   71 GAAWRNFLADGKGE-WFARWNAMAQPRINQLAAIAESEREGGGGAGPFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPAV 150
            G  W+N+L+   G  WF  WN   Q +++ LA+IAE ERE      PFRV ++GDSTM  Q G +C F+GER GRRFDP V
Sbjct:   33 GYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAE-EREDTE-TEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEV 111          
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Match: D7FJN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 7.610e-15
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   71 GAAWRNFLADGKGE-WFARWNAMAQPRINQLAAIAESEREGGGGAGPFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPAV 150
            G  W+N+L+   G  WF  WN   Q +++ LA+IAE ERE      PFRV ++GDSTM  Q G +C F+GER GRRFDP V
Sbjct:   33 GYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAE-EREDTE-TEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEV 111          
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Match: D7FJP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP2_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 5.950e-9
Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 0
Query:   96 RINQLAAIAESEREGGGGAGPFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPAVRG 152
            +++ LAA+ E++ +GG    PFRV +VGDSTM  Q+G LC F+GER GRR++P   G
Sbjct:   64 KLDVLAALVENQ-QGGRREQPFRVLMVGDSTMRHQYGALCGFMGERGGRRYNPREEG 119          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13639.2768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G0U4_ECTSI1.670e-3063.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXH8_9PHAE4.700e-3063.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKK9_ECTSI7.950e-1650.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJN9_ECTSI7.610e-1550.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJP2_ECTSI5.950e-950.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13639contigL-elsbetiae_contig13639:73..4809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13639.2768.1mRNA_L-elsbetiae_contig13639.2768.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13639 73..4809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13639.2768.1 ID=prot_L-elsbetiae_contig13639.2768.1|Name=mRNA_L-elsbetiae_contig13639.2768.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
STRPPGLVDRRRVGPSSTRADSSTPSRWPASQHIKRLPVVLLIGGIAAAV
AMALVAPLPKADAQPEKYMDGAAWRNFLADGKGEWFARWNAMAQPRINQL
AAIAESEREGGGGAGPFRVAIVGDSTMMQQHGVLCAFLGERPGRRFDPAV
RG*
back to top