prot_L-elsbetiae_contig1363.2762.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1363.2762.1
Unique Nameprot_L-elsbetiae_contig1363.2762.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length530
Homology
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BLAST of mRNA_L-elsbetiae_contig1363.2762.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.010e-7
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:   16 GGVRSQKCVHQGCVKRPSFGAVGTKRREFCKEHAEDGMVGLSHK 59
            GG R  +C H+ C KRP++G  G+K+REFC +HA DGMV +++K
Sbjct:   57 GGSRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 100
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BLAST of mRNA_L-elsbetiae_contig1363.2762.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.020e-5
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   22 KCVHQGCVKRPSFGAVGTKRREFCKEHAEDGMVGLSHK 59
            +C H  C KRP++G  G+K+REFC +HA DGMV +++K
Sbjct:    3 QCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 40
[Close]
BLAST of mRNA_L-elsbetiae_contig1363.2762.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 8.560e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:   18 VRSQKCVHQGCVKRPSFGAVGTKRREFCKEHAEDGM 53
            V +++C H GC KRPSFG  G+K++EFC +HA  GM
Sbjct:    4 VVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1363.2762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE6.010e-752.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI4.020e-552.63EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI8.560e-555.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1363contigL-elsbetiae_contig1363:5763..7352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1363.2762.1mRNA_L-elsbetiae_contig1363.2762.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1363 5645..7821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1363.2762.1 ID=prot_L-elsbetiae_contig1363.2762.1|Name=mRNA_L-elsbetiae_contig1363.2762.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=530bp
MEFRDAQACAGHTVEGGVRSQKCVHQGCVKRPSFGAVGTKRREFCKEHAE
DGMVGLSHKRCAHQGCGKQSTFGVAGSKKVDFCFGHAKEGMVNVTNFRAC
AHEGCTKHSSHGATGTKKREFCAGHAKQGMVELNTKRCAQQGCSKRSSFG
VAGTKKIEFCREHAKQGMVDLRNKKCAQRDCTKGPSFGVAGTNKREFCRE
HAEQGMVDIMHKRCSNPGCSKIPSFGVVGTKNREFCAGHAKEGMVNVNHN
KGAHRGCTKAPSFGVAGIKKDESYRAHAGEGQMRVPVEVNGVQGSVDAPG
ALAAPPPHALVPPQASMGTSSDSNGRTMRPPARSQHRNGLDRPSTQEPKS
AMSKGTFRRQNNDGAFLPRAAVEPQGGEVTDKEPSAVVAESSYRSPPNPS
AGGERGVPASVKVENVELLSRVLVRGDDPAGDEHATARRIGNERSERKGR
APPSSARTNAAAAMAAGNKGSRCRRAKRARPASNDDVVVLEADDVMLVGA
STTRTAGRKTHTETGASVKIEPAPCMSTV*
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