prot_L-elsbetiae_contig1362.2756.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1362.2756.1
Unique Nameprot_L-elsbetiae_contig1362.2756.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length398
Homology
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A6H5KL23_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL23_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 2.640e-160
Identity = 288/400 (72.00%), Postives = 313/400 (78.25%), Query Frame = 0
Query:    3 KNMPENPLLGSLMYLRHCRGCQEKSGRIERFVDLSLTLPEARNHHVIAHG--SPPVNLEKILEDFTQQQLVEDVECPKCAMRSAMEANHTQAHEEXXXXXXXXXXVV----VPPKRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVVFPVQLNVAPFCYTGGCHTESIGVSTAFKMKSALASSLPQLPPGPMAKT-PARAGALSEAFLQTP---PPASSPALAKALQSPQPHPGIKQALVGGSVAGAGVSASAGGRKELNGLPNG-GLRAGGSSVSESVEG-RDSMDGGSVSGHDGGMDYDLRAVIVHRGGADSGHYTAFRKLESNH----EETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            KN+PENPLLGSLMYLRHCRGCQ+KSGR+ERFVDLSLTLPEARN HV+  G  SPPVNLEKILEDFT++QLVEDVECPKCAMRSAMEA  T   E XXXXXXXXXX      VPP+RVRADMRMLLATPPKTLCLHFPRRH+SPSGSEMKLKQRV+FP  LNVA FCY GGCHT+SIGV TAF+ KS LA+SL QLP G   KT P  AG   EA L TP   P ASSP  AKALQSPQP PG KQALVGGS   A ++ S   RKELNGL +G G   GGSSVS SVEG RDS D GSVSG+DG M+YDLRAVIVHRG ADSGHYTAFRK++S+     EE V A P    +A  GE    K G G  K+EWVYISDE+VE VSEK+VLSS+AYMLFYRQ
Sbjct:  228 KNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNLEKILEDFTREQLVEDVECPKCAMRSAMEARETHDEESXXXXXXXXXXXXXXXXVPPQRVRADMRMLLATPPKTLCLHFPRRHRSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQTKSMLANSLTQLPQGHAVKTTPGAAGLPPEALLPTPRPPPSASSPPQAKALQSPQPLPGYKQALVGGSAQEASIAYS---RKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDKGKPVEEEVPAGPEPVSEAPRGE---RKVGGGCAKKEWVYISDEEVERVSEKRVLSSQAYMLFYRQ 621          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: D7G4R1_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R1_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 2.180e-155
Identity = 282/400 (70.50%), Postives = 309/400 (77.25%), Query Frame = 0
Query:    3 KNMPENPLLGSLMYLRHCRGCQEKSGRIERFVDLSLTLPEARNHHVIAHG--SPPVNLEKILEDFTQQQLVEDVECPKCAMRSAMEANHTQAHEEXXXXXXXXXX-------VVVPPKRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVVFPVQLNVAPFCYTGGCHTESIGVSTAFKMKSALASSLPQLPPGPMAKT-PARAGALSEAFLQTPPPASSPAL---AKALQSPQPHPGIKQALVGGSVAGAGVSASAGGRKELNGLPNG-GLRAGGSSVSESVEG-RDSMDGGSVSGHDGGMDYDLRAVIVHRGGADSGHYTAFRKLESNHEETVEA-LPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            KN+PENPLLGSLMYLRHCRGCQ+KSGR+ERFVDLSLTLPEARN HV   G  SPPVNL+KILEDFT++QLVEDVECPKCAMRSAMEA+ T  H+EXXXXXXXXXX       VVVP +RVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRV+FP  LNVA FCY GGCHT+SIGV TAF+MKS LA+SLPQLP G   KT P  AG   EA L TP           AKALQSPQ  PG KQALVGGS   A  + S   RKELNGL +G G   GGSSVS SVEG RDS D GSVSG+DG M+YDLRAVIVHRG ADSGHYTAFRK++S+  E VE  +P  + +         KGG G   +EWVYISDE+VE VSEK+VLSS+AYMLFYRQ
Sbjct:  222 KNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVAGPGVPSPPVNLDKILEDFTREQLVEDVECPKCAMRSAMEAHET--HDEXXXXXXXXXXXXXXXEEVVVPLQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVKTTPGSAGLPPEALLPTPXXXXXXXXXPQAKALQSPQSLPGYKQALVGGSAQEASTAYS---RKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDKGEPVEEEVPAGSERVSEAPRGERKGGGGGANKEWVYISDEEVERVSEKRVLSSQAYMLFYRQ 616          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A835Z8G7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.370e-8
Identity = 54/158 (34.18%), Postives = 68/158 (43.04%), Query Frame = 0
Query:    9 PLLGSLMYLRHCRGCQ-EKSGRIERFVDLSLTLPEARN--------HHVIAHGSPPVNLEKILEDFTQQQLVEDVECPKCAMRSAMEANHTQAHEEXXXXXXXXXXVVVPPKRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEM-KLKQRVVFPVQL 156
            P+ G+L     C  C   K   +  F+D+SL LPEA          HH  ++G    N    L  F Q++ VE VEC  C  R   E    +               V          R+ LA  P+ LCLHF RRH SPS   M KL QRV FP++L
Sbjct:  169 PMQGTLCSSLRCVVCNTSKPLTVAPFIDISLPLPEAYQLYGGGASAHHASSNGFANGN-GACLRAFMQEEEVEGVECDACTHRRRRERRIQERLRRGDGEGPELRTFV---------KRLSLARLPRVLCLHFCRRHYSPSRERMVKLSQRVRFPLEL 316          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A8C6ZIJ5_NOTPE (USP domain-containing protein n=2 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6ZIJ5_NOTPE)

HSP 1 Score: 60.8 bits (146), Expect = 5.270e-8
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            Y L  ++ H G    GHY A+ K+ +  ++ +E +    R AL     G K  VGA   +WVY+SD  V+ V E +VLS++AY+LFY +
Sbjct:   23 YSLYGIVEHSGSMRGGHYAAYVKVRTPSKKILEHIS-ATRNAL-----GVKEAVGAAAGQWVYVSDAHVQVVPEARVLSAQAYLLFYER 105          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A6I8PLY4_XENTR (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8PLY4_XENTR)

HSP 1 Score: 63.2 bits (152), Expect = 4.940e-7
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            Y L  ++ H G    GHYTA+ K+    ++  E +PG           G++GG     + WVY+SD  V+ VSE +VLSS+AY+LFY +
Sbjct:  723 YSLYGIVEHSGSMRGGHYTAYVKIRMPFKKVSEKIPGNKNSV------GQRGGPELSSQ-WVYVSDTHVQMVSESRVLSSQAYLLFYEK 804          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A7K7B229_9AVES (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7B229_9AVES)

HSP 1 Score: 62.4 bits (150), Expect = 8.660e-7
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            Y L  ++ H G    GHY A+ K+ +  ++ +E +   AR AL     G K  VGA   +WVY+SD  V+ V E +VLS++AY+LFY +
Sbjct:  716 YSLYGIVEHSGSMRGGHYAAYVKVRTPSKKILEHIS-AARNAL-----GVKEAVGAAAGQWVYVSDAHVQVVPEARVLSAQAYLLFYER 798          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: UPI00072DCD1D (ubiquitin carboxyl-terminal hydrolase 45-like n=2 Tax=Poecilia TaxID=8080 RepID=UPI00072DCD1D)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-6
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQRI 388
            Y L  ++ H G    GHYTA+ K+ +    T +    L+         G K   G+ + +WVY+SD  V+TV E +VLSS+AY+LFY + +
Sbjct:  517 YSLYGIVEHSGSMRGGHYTAYVKVRAPQRRTEQRHKNLS---------GAKEAGGSSQGQWVYVSDTTVQTVPESRVLSSQAYLLFYEEML 598          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A3B3V6S6_9TELE (Ubiquitinyl hydrolase 1 n=6 Tax=Poecilia TaxID=8080 RepID=A0A3B3V6S6_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 1.140e-6
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQRI 388
            Y L  ++ H G    GHYTA+ K+ +    T +    L+         G K   G+ + +WVY+SD  V+TV E +VLSS+AY+LFY + +
Sbjct:  695 YSLYGIVEHSGSMRGGHYTAYVKVRAPQRRTEQRHKNLS---------GAKEAGGSSQGQWVYVSDTTVQTVPESRVLSSQAYLLFYEEML 776          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A3B3WK30_9TELE (Ubiquitinyl hydrolase 1 n=2 Tax=Poecilia TaxID=8080 RepID=A0A3B3WK30_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 1.140e-6
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQRI 388
            Y L  ++ H G    GHYTA+ K+ +    T +    L+         G K   G+ + +WVY+SD  V+TV E +VLSS+AY+LFY + +
Sbjct:  702 YSLYGIVEHSGSMRGGHYTAYVKVRAPQRRTEQRHKNLS---------GAKEAGGSSQGQWVYVSDTTVQTVPESRVLSSQAYLLFYEEML 783          
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Match: A0A1L8G9C6_XENLA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8G9C6_XENLA)

HSP 1 Score: 62.0 bits (149), Expect = 1.150e-6
Identity = 33/89 (37.08%), Postives = 47/89 (52.81%), Query Frame = 0
Query:  298 YDLRAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGGVGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQ 386
            Y L  ++ H G    GHYTA+ K+     +  E + G      H +       V A   +WVY+SD  V+ VSE +VLSS+AY+LFY +
Sbjct:  723 YSLYGIVEHSGSMRGGHYTAYVKIRMPFNKVNEKITGNKNSIGHRD-------VAASSSQWVYVSDTHVQMVSESRVLSSQAYLLFYEK 804          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1362.2756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL23_9PHAE2.640e-16072.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
D7G4R1_ECTSI2.180e-15570.50Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A835Z8G7_9STRA4.370e-834.18Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A8C6ZIJ5_NOTPE5.270e-838.20USP domain-containing protein n=2 Tax=Nothoprocta ... [more]
A0A6I8PLY4_XENTR4.940e-738.20Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Xeno... [more]
A0A7K7B229_9AVES8.660e-739.33Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
UPI00072DCD1D1.000e-636.26ubiquitin carboxyl-terminal hydrolase 45-like n=2 ... [more]
A0A3B3V6S6_9TELE1.140e-636.26Ubiquitinyl hydrolase 1 n=6 Tax=Poecilia TaxID=808... [more]
A0A3B3WK30_9TELE1.140e-636.26Ubiquitinyl hydrolase 1 n=2 Tax=Poecilia TaxID=808... [more]
A0A1L8G9C6_XENLA1.150e-637.08Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Xeno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 81..384
e-value: 2.5E-22
score: 79.6
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 20..387
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 298..315
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..387
score: 22.794
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 5..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1362contigL-elsbetiae_contig1362:22866..25644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1362.2756.1mRNA_L-elsbetiae_contig1362.2756.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1362 22284..25664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1362.2756.1 ID=prot_L-elsbetiae_contig1362.2756.1|Name=mRNA_L-elsbetiae_contig1362.2756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=398bp
MPKNMPENPLLGSLMYLRHCRGCQEKSGRIERFVDLSLTLPEARNHHVIA
HGSPPVNLEKILEDFTQQQLVEDVECPKCAMRSAMEANHTQAHEEDEEDE
EEDEEVVVPPKRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRV
VFPVQLNVAPFCYTGGCHTESIGVSTAFKMKSALASSLPQLPPGPMAKTP
ARAGALSEAFLQTPPPASSPALAKALQSPQPHPGIKQALVGGSVAGAGVS
ASAGGRKELNGLPNGGLRAGGSSVSESVEGRDSMDGGSVSGHDGGMDYDL
RAVIVHRGGADSGHYTAFRKLESNHEETVEALPGLARKALHGEGEGEKGG
VGAGKEEWVYISDEDVETVSEKKVLSSEAYMLFYRQRISDVFHQGLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf