prot_L-elsbetiae_contig13573.2720.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13573.2720.1
Unique Nameprot_L-elsbetiae_contig13573.2720.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
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BLAST of mRNA_L-elsbetiae_contig13573.2720.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 7.990e-61
Identity = 122/177 (68.93%), Postives = 131/177 (74.01%), Query Frame = 0 
Query:    2 AAVVLTLEGEVGEIIQGAPERVGWMAGAGIRGTFCKDGTDGKIKGSWSAQAAATALEPLQPGGMRVNVGLLPDRLLAAEGNGLAGGSSRSSG---------GRDLAAGPAMGSSCRSVWVTGGGND-SGLNAGGRGFSALNSGLQPPSGPLIATVEVHPEPPSDALFPDPITWEPRT 168
            A+ VLTLEG+VGE+ QGAPERVGW AGA IRGTFCKDGTDG IKG WSA+A ATALEPLQPGGMR+NVGLLPDRLLAAEGN   G                G DL    AMGSSCRSVWV GG     GL+A GRGFSALN+GL   SGPLIATVEVHPEPPS A FPDP +W+  T
Sbjct: 5814 ASAVLTLEGKVGEVFQGAPERVGWAAGAEIRGTFCKDGTDGTIKGKWSAKAVATALEPLQPGGMRLNVGLLPDRLLAAEGNNPGGXXXXXXXXXXXXXXXXGTDL----AMGSSCRSVWVVGGXXXXGGLSAAGRGFSALNAGLPSQSGPLIATVEVHPEPPSAADFPDPASWDAAT 5986
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BLAST of mRNA_L-elsbetiae_contig13573.2720.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 2.110e-58
Identity = 119/173 (68.79%), Postives = 128/173 (73.99%), Query Frame = 0 
Query:    2 AAVVLTLEGEVGEIIQGAPERVGWMAGAGIRGTFCKDGTDGKIKGSWSAQAAATALEPLQPGGMRVNVGLLPDRLLAAEGNGLAGGSS----RSSGGRDLA-AGPAMGSSCRSVWVTGGGNDSGL-NAGGRGFSALNSGLQPPSGPLIATVEVHPEPPSDALFPDPITWEPRT 168
            A+ V TLEG+VGE+ QGAPERVGW AGA IRGTFCKDGTDG IKG WSA+AAATALEPLQPGGMR+NVGLLPDRLLAAEGN   G       RSS         P MGSSCRSVWV G        +A GRGFSALN+GL   SGPLIATVEVHPEPPS A FPDP +W+  T
Sbjct: 6331 ASAVFTLEGKVGEVFQGAPERVGWAAGAEIRGTFCKDGTDGTIKGKWSARAAATALEPLQPGGMRLNVGLLPDRLLAAEGNNPGGXXXXXXXRSSXXXXXXXTDPGMGSSCRSVWVVGXXXXXXXXSAAGRGFSALNAGLPSQSGPLIATVEVHPEPPSAADFPDPASWDEAT 6503
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13573.2720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCZ5_ECTSI7.990e-6168.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT07_9PHAE2.110e-5868.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13573contigL-elsbetiae_contig13573:927..1891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13573.2720.1mRNA_L-elsbetiae_contig13573.2720.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13573 927..1891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13573.2720.1 ID=prot_L-elsbetiae_contig13573.2720.1|Name=mRNA_L-elsbetiae_contig13573.2720.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
VAAVVLTLEGEVGEIIQGAPERVGWMAGAGIRGTFCKDGTDGKIKGSWSA
QAAATALEPLQPGGMRVNVGLLPDRLLAAEGNGLAGGSSRSSGGRDLAAG
PAMGSSCRSVWVTGGGNDSGLNAGGRGFSALNSGLQPPSGPLIATVEVHP
EPPSDALFPDPITWEPRTTAGTVATIAEEGSVAAA
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