prot_L-elsbetiae_contig13308.2562.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13308.2562.1
Unique Nameprot_L-elsbetiae_contig13308.2562.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
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BLAST of mRNA_L-elsbetiae_contig13308.2562.1 vs. uniprot
Match: A0A6H5JVW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.070e-14
Identity = 49/102 (48.04%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:    4 GDRGVLLRGQEACLDNGDGVGAHGWLLASSXXXXXXXXXXXXVPLDXXXXXXXXXXXXXXXLRGGAGTADAGAVVLLLACYQNLIGVLHTGLEASRWRPRPR 105
            GDRGVLL+G E      +   A  WL   S             P                 +R G   ADAGAVVLLLACYQNLIGVLH+GLEASRWRPRPR
Sbjct:  337 GDRGVLLKGLETSAMGEET--ARRWLPPPSAADGRQAEEK---PNAIIPVGGEGSQERGGGVRNGGNAADAGAVVLLLACYQNLIGVLHSGLEASRWRPRPR 433
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13308.2562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVW6_9PHAE1.070e-1448.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13308contigL-elsbetiae_contig13308:335..2551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13308.2562.1mRNA_L-elsbetiae_contig13308.2562.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13308 335..2750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13308.2562.1 ID=prot_L-elsbetiae_contig13308.2562.1|Name=mRNA_L-elsbetiae_contig13308.2562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MGEGDRGVLLRGQEACLDNGDGVGAHGWLLASSAAKEEEERLSALVPLDG
DDNGSGGGSRGGGVLRGGAGTADAGAVVLLLACYQNLIGVLHTGLEASRW
RPRPR*
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