prot_L-elsbetiae_contig1304.2409.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1304.2409.1
Unique Nameprot_L-elsbetiae_contig1304.2409.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1031
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 1.260e-100
Identity = 180/253 (71.15%), Postives = 196/253 (77.47%), Query Frame = 0 
Query:  215 AASRAPTSRSAANTGTGTGRRIS---DGGGRGXXXXXXXXXXXXXAMEPPVAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNFATEAEADRVIAEQEECGDGNGECRSCQSVVGPTRRPTSCRDLAPFPNCTPLQRLHYHANLSRGLEPFYRVPSPPYSGEDFGGGSMECRSCREVAGAPPRPNCRDLPPYPNVTTRAPTAPGTG-TTQPRGAEAGAA 463
            A SRAP SRSAAN GTG GRR     +GGGR              ++E PV PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDK MTNFATEAEADRVIAEQEECGDG GECRSCQSVVGPTRRP +CRDLAP+PNC+P++RL +HANLSRGLEP+YR PS  Y GE    G+ ECRSC+ V G+ PRP CRD PPYPNV+      PG G +T+P     G A
Sbjct:   88 AGSRAPVSRSAANAGTGAGRRRQRGEEGGGRAGGDE---------SLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSP-----PGLGGSTEPESRGQGGA 326
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 2.010e-92
Identity = 171/236 (72.46%), Postives = 186/236 (78.81%), Query Frame = 0 
Query:  217 SRAPTSRSAANTGTGTGRRIS--------DGGGRGXXXXXXXXXXXXXAMEPPVAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNFATEAEADRVIAEQEECGDGNGECRSCQSVVGPTRRPTSCRDLAPFPNCTP---LQRLHYHANLSRGLEPFYRVPSPPYSGEDFGGGSMECRSCREVAGAPPRPNCRDLPPYPNVT 441
            SRAP SRSAAN GTG GRR +         GGG G             ++E PV PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDK MTNFATEAEADRVIAEQEECGDG GECRSCQSVVGPTRRP +CR LAP+PNC+P   ++RL +HANLSRGLEP+YR PS  Y GE    G+ ECRSC+ VAG+ PRP CRD PPYP+V+
Sbjct:   73 SRAPVSRSAANAGTGAGRREARPRSLREEGGGGAGGDE----------SLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRALAPYPNCSPVGEMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVAGSGPRPICRDFPPYPDVS 298
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.420e-26
Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 0 
Query:  266 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNFATEAEADR 337
            RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF D  + NF +E EADR
Sbjct:   97 RRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADR 168
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 116 bits (291), Expect = 6.850e-26
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0 
Query:  266 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR+HF  + M NF
Sbjct:   21 RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.060e-22
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:  276 YRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR HF D+ M NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 9.400e-14
Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:  260 PPVAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            P V    RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E EAAKA+D +A  +F D  + NF
Sbjct:  136 PRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 1.170e-13
Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:  260 PPVAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            P V    RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E EAAKA+D +A  +F D  + NF
Sbjct:  149 PRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.670e-13
Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:  257 AMEPPVAPRR-----RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            A  PPV P R     RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE +AA+A+D AA  HF +    NF
Sbjct:  384 ASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 0 
Query:  265 RRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNFATEAEA 335
            R RRGRKG+SIYRGV  TREGK+RAV+Y ERKQ+YLGVY  E+ AA+AHD+    H       NF  E  A
Sbjct:  123 RPRRGRKGKSIYRGVSHTREGKYRAVLYVERKQIYLGVYNDEVSAARAHDKGVLAHGLGHAYLNFKLEEAA 193
[Close]
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 6.860e-12
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0 
Query:  267 RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKCMTNF 329
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE +AA+A+D AA  HF +    NF
Sbjct:  341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1304.2409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FZ71_ECTSI1.260e-10071.15AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE2.010e-9272.46AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JUY3_9PHAE2.420e-2681.94AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CI56_9STRA6.850e-2684.38AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA4.060e-2285.19AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A6V1UZI2_HETAK9.400e-1458.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK1.170e-1358.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KQM0_9PHAE3.670e-1355.13AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835ZDL0_9STRA1.500e-1259.15AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
D8LFR4_ECTSI6.860e-1258.73Pathogenesis-related transcriptional factor and ER... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 275..336
e-value: 3.2E-7
score: 40.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 275..330
score: 12.181
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 275..332
e-value: 3.2E-10
score: 41.7
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 26..542
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 274..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1304contigL-elsbetiae_contig1304:8436..23827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1304.2409.1mRNA_L-elsbetiae_contig1304.2409.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1304 8233..25545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1304.2409.1 ID=prot_L-elsbetiae_contig1304.2409.1|Name=mRNA_L-elsbetiae_contig1304.2409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1031bp
MEVLEESNREGDTQGEGKKQERPNPEAATGGGGAQAAAEEETPAAHAHAP
KRNVRTPAVVPKRATRASTGAPIALTAKGSLYKANKDTGERGKERERGRR
RGCDRASSEEEEDRDDESSYQRFRGRVPPTPAFRGATASATFGEYNSRPR
PAPASSSSWSPPSSAAGAPRAAGGDPFSRPSAAAPSSGHASFASRPLPPP
PPPPSSSSSAAAMGAASRAPTSRSAANTGTGTGRRISDGGGRGGAAGGRG
GSPGEEAMEPPVAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYL
GVYESELEAAKAHDRAARFHFPDKCMTNFATEAEADRVIAEQEECGDGNG
ECRSCQSVVGPTRRPTSCRDLAPFPNCTPLQRLHYHANLSRGLEPFYRVP
SPPYSGEDFGGGSMECRSCREVAGAPPRPNCRDLPPYPNVTTRAPTAPGT
GTTQPRGAEAGAATTAGAAETAAEMAAASAAAATSRSGGGTAASRGFGQP
WDGGQAGASGDGTGAVAGAGGGYGGIGAFNDYAEGGGSRGAGVWLAQAGL
GMEERHDDAMFRSQGGAAFPNARLPPPSGPAGFALDQPDGGAQPGEYGGG
GGGGLLPSEQGPGPSDPVAAAAAGFALARQHHDATARGWGGGGNGHGNNL
AAAGAMSLLGVPAPTEGSRGTGTAVPQGGGGDWMDKSPGYFPNVAALTAA
AAAAVADGESSRRIDEAIGAGGGMAAGGVGDVAPPGTKRLRPSLDGTEQQ
QQQQQQQQQQQQQGTGLERGAPATASAAMPSPGLAPRPFSSVSAATTLPS
DARVAAALPPASMSAAAASAAAPAAAAAAAAGRVAGDGGFGAARQAPAPL
ASGNGSRAAERSLPASRPPPEGGRGDKTDAEAPMSNPFAAILSPVAGPIA
PSPASRFACTAGDGSGSGVTGGTASSGAFGSSSSPPSSAAAAAAGKYIGV
DEAAAAIAALSKAFSPGEAAGAGAGGGGGAAAENGGAGAAGDKPAGGPAY
KEGKPDGPGAVDASAAVMPAAAGAAVATGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf