prot_L-elsbetiae_contig13000.2384.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13000.2384.1
Unique Nameprot_L-elsbetiae_contig13000.2384.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length485
Homology
BLAST of mRNA_L-elsbetiae_contig13000.2384.1 vs. uniprot
Match: A0A6H5KKJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ1_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 1.190e-117
Identity = 277/488 (56.76%), Postives = 311/488 (63.73%), Query Frame = 0
Query:    1 RETEELLESGEAYYLVYGREGHQLLRDNRWDLQLWDFALKLVESRSTSKESYLCGSSMAARSQRMPGEGRRAVVYNSPSFHITGVAMFSCVLTSLGFDVTAVIKDPGAGFQDLLPCPNTVVTLVGNYLPGVPGEILNEATAAALGLPAGMTADQQERRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEPGGYRGRGPGAEDRGVATRQPRIREEKEEEEEKAGEEWGVGVRGITGGRRGRSELNDAGG-RVPGGEEGEGEVRASGGLSLSRSAAGVEGXXXXXXXXXXXXXXXXXXXXXXXXXGGRR---PFDLSVLCTMVSDVNHLMKPRYPVDPRLVDALLWDVDVSIWNLHSVEGAFRSDHRVPPAAEDYLRGVPSMAERGGGGRTPPLSFLTLYGEHVEQ 484
            RETE+LLESGEAYYLV+G+EG +LLRDNRWDLQLWDFA KLVESRST+ E YLCGSS +AR QRMPG+GRRAVVYNSPSFH+TGVAMFSCVL SLGFDVTAV+K+PGAGF+ LLPCP+ VV L  +YL  +PGEIL+E  AAAL LP  +TA+Q+E R                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                    RG G E+     R  R+R  KE++E  AGE+    V G TG RR R+   D GG RV  G    G+ R  G       + G+ G                         GGR    PFDLSVLCT V+DVNHL+K  YPVDPRL DALLWDVDVSIWN+HSVEGAFRSDHR+PPA +D+ RGVPS AERGGGGR PPL+FLTLYGEHVEQ
Sbjct:  205 RETEDLLESGEAYYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLCGSSTSARRQRMPGDGRRAVVYNSPSFHVTGVAMFSCVLMSLGFDVTAVVKEPGAGFEHLLPCPDRVVALSEHYLRDLPGEILDEEAAAALSLPESLTAEQEEER-----------LRQQALHLERLRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGFSLEGGSRGAALGGDGDDGFGALDVGVQEGSDREGSRAAXXXXXXXNSRGLGHEE----LRLRRLRR-KEDDERSAGED----VLG-TGRRRERTGSEDGGGPRVLDGRGCAGQ-RDGGDADKRHGSRGLGGAELSGRVSAAAGGDGRQVEGGEGRGGGRGRGGPFDLSVLCTAVNDVNHLLKATYPVDPRLADALLWDVDVSIWNVHSVEGAFRSDHRMPPAVDDFARGVPSSAERGGGGRPPPLTFLTLYGEHVEQ 670          
BLAST of mRNA_L-elsbetiae_contig13000.2384.1 vs. uniprot
Match: D8LSI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI2_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.050e-110
Identity = 255/483 (52.80%), Postives = 284/483 (58.80%), Query Frame = 0
Query:    1 RETEELLESGEAYYLVYGREGHQLLRDNRWDLQLWDFALKLVESRSTSKESYLCGSSMAARSQRMPGEGRRAVVYNSPSFHITGVAMFSCVLTSLGFDVTAVIKDPGAGFQDLLPCPNTVVTLVGNYLPGVPGEILNEATAAALGLPAGMTADQQERRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEPGGYRGRGPGAEDRGVATRQPRIREEKEEEEEKAGEEWGVGVRGITGGRRGRSELNDAGGRVPGGEEGEGEVRASGGLSLSRSAAGVEGXXXXXXXXXXXXXXXXXXXXXXXXXGGRR---PFDLSVLCTMVSDVNHLMKPRYPVDPRLVDALLWDVDVSIWNLHSVEGAFRSDHRVPPAAEDYLRGVPSMAERGGGGRTPPLSFLTLYGE 480
            RETE+LLESGEA+YLV+G+EG +LLRDNRWDLQLWDFA KLVESRST+ E YLCGSS +AR QRMPG+GRRAVVYNSPSFHITGVAMFSCVL SLGFDVTAV+K+PGAGF+ LLPCP+ VV L  +YL  +PGEIL+E   AAL LP  +TA+Q+E R                                                                    G          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +  G R    G+ED G     PR                 V  RG  G R G       G R  GG E  G V  + G    R   G EG                         GGR    PFDLSVLCT V+DVNHL+K  YPVDPRL DALLWDVDVSIWN+HSVEGAFRSDHR+PPA +D+ RGVPS +ERGGGGRTPPL+FLTLYGE
Sbjct:  201 RETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLCGSSASARRQRMPGDGRRAVVYNSPSFHITGVAMFSCVLMSLGFDVTAVVKEPGAGFEHLLPCPDRVVALSEHYLRDLPGEILDEEAVAALSLPESLTAEQEEER----------------LRQQQVGGEQGGYPTGRGGQKRRGGEAGRRRGPALGGDGDGDLGALDVGVEEGSDRQGSRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVQGTGRRRELTGSEDGGG----PRA----------------VDGRGGAGQREGGDAEERHGSRGLGGAELSGRVSVAAGGD-GRQVEGGEGRG-----------------------GGRGRGGPFDLSVLCTAVNDVNHLLKATYPVDPRLADALLWDVDVSIWNVHSVEGAFRSDHRMPPAVDDFARGVPSSSERGGGGRTPPLTFLTLYGE 623          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13000.2384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKJ1_9PHAE1.190e-11756.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI2_ECTSI2.050e-11052.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13000contigL-elsbetiae_contig13000:134..5201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13000.2384.1mRNA_L-elsbetiae_contig13000.2384.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13000 134..5201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13000.2384.1 ID=prot_L-elsbetiae_contig13000.2384.1|Name=mRNA_L-elsbetiae_contig13000.2384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=485bp
RETEELLESGEAYYLVYGREGHQLLRDNRWDLQLWDFALKLVESRSTSKE
SYLCGSSMAARSQRMPGEGRRAVVYNSPSFHITGVAMFSCVLTSLGFDVT
AVIKDPGAGFQDLLPCPNTVVTLVGNYLPGVPGEILNEATAAALGLPAGM
TADQQERRQWQQLYYEEYQRQKQLEEEEEEEEKQEQEQQEQEEERRKQEL
EQQQQEGLEQQQEGQREQGQGREEEEGETGGGRARRAAKNRRDRRRGLSA
AAPGGGGGGRGGGSSRTRRRDEPGGYRGRGPGAEDRGVATRQPRIREEKE
EEEEKAGEEWGVGVRGITGGRRGRSELNDAGGRVPGGEEGEGEVRASGGL
SLSRSAAGVEGEEEDGGRGGGSGGARRAEGEGEGEGGGRRPFDLSVLCTM
VSDVNHLMKPRYPVDPRLVDALLWDVDVSIWNLHSVEGAFRSDHRVPPAA
EDYLRGVPSMAERGGGGRTPPLSFLTLYGEHVEQ*
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