prot_L-elsbetiae_contig12953.2340.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12953.2340.1
Unique Nameprot_L-elsbetiae_contig12953.2340.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length287
Homology
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BLAST of mRNA_L-elsbetiae_contig12953.2340.1 vs. uniprot
Match: D7FX73_ECTSI (DRY_EERY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX73_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 6.910e-101
Identity = 245/302 (81.13%), Postives = 257/302 (85.10%), Query Frame = 0 
Query:    2 KDTGDHREKKGLETFLSFERYRGIVDAHRVGLGEKEHASAVSKQVQEKLTDIARFRKGEPDAAEIAAAKDAQDKRNKKAETKAAVKEAKNAGVHGHYGPGGXXXXXXXXXXXXXXXAGGPPPRGRGAEVALKYGGDVVAGRGXXXXXXXXXXXXXXXXXX---------AQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-------KNADAAQVLAAAQDHFAEDYGISERRSGYSYSRLLRYERRHRAQHRANRAEEIDAAKKRKRPKKKADGTPVLEGGG 287
            K TGDHREKKGLETFLSFERYRGIVDA RVGLGEKEHA AVSKQV+EKL+DIARF+KGEPDAAE+AAAK+AQDKRNKKAETKAA+KEAKNAGVHGHYGPG   XXXXXXX          P RGRGAEVALKYGGDVV G+   XXXXXXXXXXXXXXXX         AQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        KNADAAQ L+A+QD FAEDYGISE+RSGYSYSRLLRYERRHRAQHRANR  E+DAAKKRK+PKKKADGTPV E  G
Sbjct:   95 KGTGDHREKKGLETFLSFERYRGIVDAQRVGLGEKEHALAVSKQVEEKLSDIARFKKGEPDAAELAAAKEAQDKRNKKAETKAAIKEAKNAGVHGHYGPGAGGXXXXXXXGGVPL-----PSRGRGAEVALKYGGDVVGGKSAGXXXXXXXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADAAQALSASQDLFAEDYGISEKRSGYSYSRLLRYERRHRAQHRANRMAEVDAAKKRKKPKKKADGTPVEEENG 391
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BLAST of mRNA_L-elsbetiae_contig12953.2340.1 vs. uniprot
Match: A0A6H5L0Z8_9PHAE (DRY_EERY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 3.740e-54
Identity = 93/101 (92.08%), Postives = 99/101 (98.02%), Query Frame = 0 
Query:    2 KDTGDHREKKGLETFLSFERYRGIVDAHRVGLGEKEHASAVSKQVQEKLTDIARFRKGEPDAAEIAAAKDAQDKRNKKAETKAAVKEAKNAGVHGHYGPGG 102
            KDTGDHREKKGLETFLSFERYRGIVDA RVGLGEKEHA AVSKQV+EKL+DIARF+KGEPDAAE+AAAK+AQDKRNKKAETKAA+KEAKNAGVHGHYGPGG
Sbjct:   95 KDTGDHREKKGLETFLSFERYRGIVDAQRVGLGEKEHALAVSKQVEEKLSDIARFKKGEPDAAELAAAKEAQDKRNKKAETKAAIKEAKNAGVHGHYGPGG 195
[Close]
BLAST of mRNA_L-elsbetiae_contig12953.2340.1 vs. uniprot
Match: A0A6H5KYK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK4_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.540e-35
Identity = 147/178 (82.58%), Postives = 152/178 (85.39%), Query Frame = 0 
Query:  122 PPRGRGAEVALKYGGDVVAGRGXXXXXXXXXXXXXXXXXX-AQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---------KNAD--AAQVLAAAQDHFAEDYGISERRSGYSYSRLLRYERRHRAQHRANRAEEIDAAKKRKRPKKKADGTPVLEGGG 287
            P RGRGAEVALKYGGDVV G+ XXXXXXXXXXXXXXXXXX AQLDPEILALIEKE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          KNAD  AAQ L+AAQD FAEDYGISE+RSGYSYSRLLRYERRHRA HRANR  E+DAAKKRK+PKKKADGTPV E  G
Sbjct:    9 PSRGRGAEVALKYGGDVVGGKSXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADDLAAQALSAAQDLFAEDYGISEKRSGYSYSRLLRYERRHRALHRANRMAEVDAAKKRKKPKKKADGTPVEEENG 186
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12953.2340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX73_ECTSI6.910e-10181.13DRY_EERY domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L0Z8_9PHAE3.740e-5492.08DRY_EERY domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KYK4_9PHAE2.540e-3582.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
IPR020467Potassium channel, voltage dependent, Kv1.4PRINTSPR01511KV14CHANNELcoord: 105..115
score: 88.31
coord: 186..200
score: 42.86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12953contigL-elsbetiae_contig12953:687..5271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12953.2340.1mRNA_L-elsbetiae_contig12953.2340.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12953 687..5271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12953.2340.1 ID=prot_L-elsbetiae_contig12953.2340.1|Name=mRNA_L-elsbetiae_contig12953.2340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp
MKDTGDHREKKGLETFLSFERYRGIVDAHRVGLGEKEHASAVSKQVQEKL
TDIARFRKGEPDAAEIAAAKDAQDKRNKKAETKAAVKEAKNAGVHGHYGP
GGAGAAAAAAAAAATATAGGPPPRGRGAEVALKYGGDVVAGRGGGGGGES
PPPPPVQDEDEAQLDPEILALIEKEVGGAGGGDHGSSDESVLSEDDDEEE
EEEEEEEEEEPKNADAAQVLAAAQDHFAEDYGISERRSGYSYSRLLRYER
RHRAQHRANRAEEIDAAKKRKRPKKKADGTPVLEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020467K_chnl_volt-dep_Kv1.4