prot_L-elsbetiae_contig1281.2258.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1281.2258.1
Unique Nameprot_L-elsbetiae_contig1281.2258.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length79
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1281.2258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..78
e-value: 2.3E-10
score: 42.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..74
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 6..73
score: 9.564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1281contigL-elsbetiae_contig1281:465..1221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1281.2258.1mRNA_L-elsbetiae_contig1281.2258.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1281 465..1221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1281.2258.1 ID=prot_L-elsbetiae_contig1281.2258.1|Name=mRNA_L-elsbetiae_contig1281.2258.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp
HDSTYWQAYSLRGRIRFRAGDIPGALHDLTVCVREAPHDRAALNTRARLF
ASQGLWEDASRDLSAGLRGDPNDVRNAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom