prot_L-elsbetiae_contig1280.2254.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1280.2254.1
Unique Nameprot_L-elsbetiae_contig1280.2254.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length306
Homology
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BLAST of mRNA_L-elsbetiae_contig1280.2254.1 vs. uniprot
Match: B5LWG2_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG2_9PHYC)

HSP 1 Score: 110 bits (276), Expect = 4.900e-25
Identity = 85/243 (34.98%), Postives = 124/243 (51.03%), Query Frame = 0 
Query:   72 YEGNDLVARIIFGTEYDASYFECDFRISLV--CGVDVVSSTVTCDIPETAQRVANDQYNPEDSDSSSGCSSTAISLATHDATT---------YQSIEDPSYAACVVEFDKCYFVDKAKCDEVGICTKACLSNLVAGGPSFHRMMDGDSREGGRSPTLLLDDPEISPDDMLRDSQGRLRTRVNVKLIFRDHNTGTAAASMLMLKDGTKAVEGSVCEYWTHVHVLEPGIFVQAVIWKAKKTREAW 303
            YE  DL  R++F T+  A  F      +LV     D+  S   CD+PE    V    Y  ++SDS    SS  +S+AT   +T         +Q IEDP     +   DKC+ VDKA CDEVGIC K   +N++   P+ HRM+DG     G+SP + ++  EI   D + DS G  RT   +K+ FR+     A  S L L   ++ ++ +   Y T V++++P +FV+   WK K+T E W
Sbjct:   39 YEEEDLRVRLVFPTQDRAIGFANLLGDNLVGYSEGDIRHSFEPCDVPEDPVMVKVSHYVEDESDSPPNPSS--VSIATTSFSTMFCNDEDIRFQMIEDPGLLH-MGRPDKCHLVDKALCDEVGICKKRDHNNILCCMPTTHRMLDG---VPGQSPVIRIEPVEIVESDKVMDSAGVSRTACKLKIHFRE--LIIAKFSTLRLNSSSRMIDETT--YETFVYMVDPELFVRCAAWKNKRTLEMW 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1280.2254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
B5LWG2_9PHYC4.900e-2534.98Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1280contigL-elsbetiae_contig1280:19577..20624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1280.2254.1mRNA_L-elsbetiae_contig1280.2254.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1280 19384..21033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1280.2254.1 ID=prot_L-elsbetiae_contig1280.2254.1|Name=mRNA_L-elsbetiae_contig1280.2254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
MISLAGCLPFASRMFSRTRSCVRAQEAEKGFLVTINVKDARHTFSRPRRN
IFMLGAKYLGKWPQGNVSDCKYEGNDLVARIIFGTEYDASYFECDFRISL
VCGVDVVSSTVTCDIPETAQRVANDQYNPEDSDSSSGCSSTAISLATHDA
TTYQSIEDPSYAACVVEFDKCYFVDKAKCDEVGICTKACLSNLVAGGPSF
HRMMDGDSREGGRSPTLLLDDPEISPDDMLRDSQGRLRTRVNVKLIFRDH
NTGTAAASMLMLKDGTKAVEGSVCEYWTHVHVLEPGIFVQAVIWKAKKTR
EAWLE*
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