prot_L-elsbetiae_contig12798.2240.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12798.2240.1
Unique Nameprot_L-elsbetiae_contig12798.2240.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
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BLAST of mRNA_L-elsbetiae_contig12798.2240.1 vs. uniprot
Match: D7G6A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A5_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 9.140e-62
Identity = 109/165 (66.06%), Postives = 127/165 (76.97%), Query Frame = 0 
Query:    1 MVLTTTQNLSGAIESVLGQPAVMGLSLSLSVPMHLKHNVRWMSKRFVVLIADGDLEGTELLGLGIRAFVGDYHADTLNLLERHRKGSIMTSAIRDGGMIRAALSPEYAEPGEPGVVEFLTSDVNGELPNMDLFNAAVHHHERQGVAVRLDTCSAPLNGERFTCPD 165
            MVLTT+Q+LSGA E +L QP   GLSLSLSV  +LK  V WMSKR VVLIAD D +G + L LG++ F+ DYH DTL+LLERH K S MT +I+  G++RAALS EY EPGEP VV+ LTS VNGELPNMDL N AV HHERQGV VRLDTCSAPL+G++  C D
Sbjct:  171 MVLTTSQDLSGAAEDMLDQPTFTGLSLSLSVLKYLKDRVGWMSKRIVVLIADEDGQGVDRLFLGVKRFIDDYHTDTLDLLERHTKDSNMTRSIQHCGVMRAALSLEYDEPGEPQVVQLLTSGVNGELPNMDLLNVAVIHHERQGVGVRLDTCSAPLHGDQLACLD 335
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BLAST of mRNA_L-elsbetiae_contig12798.2240.1 vs. uniprot
Match: A0A1G4KIX2_9SACH (LAMI_0H15544g1_1 n=1 Tax=Lachancea mirantina TaxID=1230905 RepID=A0A1G4KIX2_9SACH)

HSP 1 Score: 56.6 bits (135), Expect = 7.840e-6
Identity = 49/145 (33.79%), Postives = 69/145 (47.59%), Query Frame = 0 
Query:   18 GQPAVMGLSLSLSVPMHLKHNVRW--MSKRFVVLIADGDLEGTELLGLGIRAFVGDYHADTLNLLERHRKGSIMTSAIRDGGMIRAALSPEYAEPGEP-GVVEFLTSDVNGELPNMDLFNAAVHHHERQGVAVRLDTCSAPLNGE 159
            GQ  V G+SL++S+   L+   RW   SK  V++I+D            +R++V  YH                TS    GG I AA+  +Y E  +    VE   S +NGELPN+DL N AVH  E +G+ V L+  S    G+
Sbjct:  147 GQFNVGGVSLAISL---LRFFSRWPVWSKNIVIVISDN-------AHTSLRSWVEAYH----------------TSLDLTGGSIEAAVVLDYPETNDFFRYVEIFYSGLNGELPNLDLVNIAVHVTEHEGMKVALNGVSENQIGD 265
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12798.2240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6A5_ECTSI9.140e-6266.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1G4KIX2_9SACH7.840e-633.79LAMI_0H15544g1_1 n=1 Tax=Lachancea mirantina TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007246GPI transamidase component Gaa1PFAMPF04114Gaa1coord: 14..150
e-value: 4.3E-13
score: 49.1
IPR007246GPI transamidase component Gaa1PANTHERPTHR13304GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEINcoord: 21..154
NoneNo IPR availablePANTHERPTHR13304:SF0GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEINcoord: 21..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12798contigL-elsbetiae_contig12798:2186..4723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12798.2240.1mRNA_L-elsbetiae_contig12798.2240.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12798 313..5173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12798.2240.1 ID=prot_L-elsbetiae_contig12798.2240.1|Name=mRNA_L-elsbetiae_contig12798.2240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MVLTTTQNLSGAIESVLGQPAVMGLSLSLSVPMHLKHNVRWMSKRFVVLI
ADGDLEGTELLGLGIRAFVGDYHADTLNLLERHRKGSIMTSAIRDGGMIR
AALSPEYAEPGEPGVVEFLTSDVNGELPNMDLFNAAVHHHERQGVAVRLD
TCSAPLNGERFTCPDVRWGRLPEPLSAACLTTTQAVLSSNTLIDCSLCWI
SWDLRQWGRVGRARTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007246Gaa1