prot_L-elsbetiae_contig12795.2239.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12795.2239.1
Unique Nameprot_L-elsbetiae_contig12795.2239.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
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BLAST of mRNA_L-elsbetiae_contig12795.2239.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.380e-21
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0 
Query:    2 TRFFELPSEAIQASLTSDDRALQALIESLPEAPAAARRQCLKMCGLDNGDDDLSYDYGY 60
            TRFFELPSEAIQASL  +D ALQ LIESLP+APAAARRQCL+ CGL +G D  SY YGY
Sbjct:  169 TRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
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BLAST of mRNA_L-elsbetiae_contig12795.2239.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.140e-15
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:    2 TRFFELPSEAIQASLTSDDRALQALIESLPEAPAAARRQCLKMCGLDNGDDDLSYDYGYDSD 63
            TRFFELP EAIQAS+  ++  LQ LIESLP+APAAAR+QCL+ C +    +  SYDY YD D
Sbjct:  168 TRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTYDVD 229
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12795.2239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDW6_ECTSI2.380e-2176.27Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE3.140e-1561.29Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12795contigL-elsbetiae_contig12795:4326..4886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12795.2239.1mRNA_L-elsbetiae_contig12795.2239.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12795 3557..5203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12795.2239.1 ID=prot_L-elsbetiae_contig12795.2239.1|Name=mRNA_L-elsbetiae_contig12795.2239.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
MTRFFELPSEAIQASLTSDDRALQALIESLPEAPAAARRQCLKMCGLDNG
DDDLSYDYGYDSDGTKDLEDI*
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