prot_L-elsbetiae_contig12783.2232.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12783.2232.1
Unique Nameprot_L-elsbetiae_contig12783.2232.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig12783.2232.1 vs. uniprot
Match: A0A6H5LKZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKZ1_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 4.430e-44
Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 0 
Query:    1 RFSAFIREQWAEGAGGLGNHMRVDGGVYAPWLKVYCGYLAARGLHLETATNAFRSWETLTSTRQLRNALTETNALLAAALALHFAGDA 88
            RFSAFI++QWAEGAG LG HMR DGGVYAPWLKVYCGYLA RGL LE ATNAFRSWETLTSTRQLRNALTETNALLA ALALHFAGDA
Sbjct:  323 RFSAFIKDQWAEGAGELGKHMRTDGGVYAPWLKVYCGYLATRGLRLEAATNAFRSWETLTSTRQLRNALTETNALLAGALALHFAGDA 410
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BLAST of mRNA_L-elsbetiae_contig12783.2232.1 vs. uniprot
Match: D8LLU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.030e-31
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 
Query:    6 IREQWAEGAGGLGNHMRVDGGVYAPWLKVYCGYLAARGLHLETATNAFRSWETLTSTRQLRN 67
            +++QWAEGAG LG HMR DGGVYAPWLKVYCGYLA RGL LE ATNAFRSWETLTS RQLRN
Sbjct:    1 MKDQWAEGAGELGKHMRTDGGVYAPWLKVYCGYLATRGLRLEAATNAFRSWETLTSIRQLRN 62
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12783.2232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKZ1_9PHAE4.430e-4489.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU9_ECTSI1.030e-3183.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12783contigL-elsbetiae_contig12783:1699..3189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12783.2232.1mRNA_L-elsbetiae_contig12783.2232.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12783 1699..3189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12783.2232.1 ID=prot_L-elsbetiae_contig12783.2232.1|Name=mRNA_L-elsbetiae_contig12783.2232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
RFSAFIREQWAEGAGGLGNHMRVDGGVYAPWLKVYCGYLAARGLHLETAT
NAFRSWETLTSTRQLRNALTETNALLAAALALHFAGDA
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