prot_L-elsbetiae_contig1278.2229.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1278.2229.1
Unique Nameprot_L-elsbetiae_contig1278.2229.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length828
Homology
BLAST of mRNA_L-elsbetiae_contig1278.2229.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 5.660e-51
Identity = 301/450 (66.89%), Postives = 327/450 (72.67%), Query Frame = 0
Query:  102 APRFSPG-FDVKSEESEIHHYAQAGDVEEVRRCLLAGLYQVDEVDGLGCTPVHLAGAMGHTSVVKLLVE-HGATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSARDANGMQARDMVGAGRRIPQGRRLDLVSMLERYQLGDYAMSRAPMSSTRSLHQLWRDRDTH------SNISFGSTPQRVEGLRMSSGPGXXXXXXXXXXXXXXXXXXXSASGTVRGGARFFGSTATFSRRDS-SFDGFPSGSFGSGAAAGEGGGAYPPGGASTMMPRGVAGEGXXXXXXXXXXXXXXXXXXXXXXXXHSPRWTMGAQVAGRLEELRARELAASLRSKVQENEAMKRYLESV 542
            A R  P   +VK EESEIHHYAQAGDVEEVRRCLLAG  +VDEVD LGCTPVHLAGAMGHT+VVKLLVE H A V    XXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DPSA+DA+G QA DMVGAGRRIPQG + D+++ LERYQ+G+Y ++RAP+SSTRSL Q+WRDRD+       S    GS P    G     G  XXXXXXXXXXXXXXXXXXX           +     + SR+ S S DGF + S G+G   GEGGG     GA+         EG                         SPRWT+GA VAGRLE +RAREL ASLR+KVQENEAMKRY+ESV
Sbjct:   66 ATRVPPSSLEVKVEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHTNVVKLLVEEHRAAVDARDXXXXXXXXXXXXXXXXXXXXXLLRLGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSAKDAHGKQAVDMVGAGRRIPQGLKFDIINTLERYQMGEYGIARAPLSSTRSLRQIWRDRDSGESTPRASTARAGSLPSGAGG-EAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAG---GEGGGPLSVRGAAMRHSSRGFSEGDGRGNGGG----------------RSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESV 495          
BLAST of mRNA_L-elsbetiae_contig1278.2229.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.650e-37
Identity = 147/260 (56.54%), Postives = 172/260 (66.15%), Query Frame = 0
Query:  305 DPSARDANGMQARDMVGAGRRIPQGRRLDLVSMLERYQLGDYAMSRAPMSSTRSLHQLWRDRDTH------SNISFGSTPQRVEGLRMSSGPGXXXXXXXXXXXXXXXXXXXSASGTVRGGARFFGSTATFSRRDS-SFDGFPSGSFGSGAAAGEGGGAYPPGGASTMMPRGVAGEGXXXXXXXXXXXXXXXXXXXXXXXXHSPRWTMGAQVAGRLEELRARELAASLRSKVQENEAMKRYLESVKEEMRVLQRKLSRHS 557
            DPSA+DA+G QA DMVGAGRRIPQG R D+++ LERYQ+G+YA++RAP+SSTRSL Q+WRDRD+       S    GS P    G        XXXXXXXXXXXXXXXXXXX           +     + SR+ S S DGF + S G+G   GEGGG     GA+         EG XXXXXXXXXXXXX           SPRWT+GA VAGRLE +RAREL ASLR+KVQENEAMKRY+ESV EEMR LQ+K+S+ S
Sbjct:  149 DPSAKDAHGKQAIDMVGAGRRIPQGLRFDIINTLERYQMGEYAIARAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAVGGAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAG---GEGGGPLSVRGAAMRHSSRGFSEGDXXXXXXXXXXXXX----------RSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQS 395          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1278.2229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD62_9PHAE5.660e-5166.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLZ4_ECTSI2.650e-3756.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 532..559
NoneNo IPR availablePFAMPF13637Ank_4coord: 118..168
e-value: 2.8E-5
score: 24.6
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 188..384
coord: 117..234
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 148..163
score: 35.04
coord: 196..210
score: 43.86
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 147..176
e-value: 3.9E-4
score: 29.8
coord: 180..209
e-value: 0.0079
score: 25.4
coord: 213..242
e-value: 0.78
score: 18.8
coord: 246..275
e-value: 4.3E-4
score: 29.6
coord: 113..143
e-value: 4000.0
score: 0.5
coord: 279..308
e-value: 2.2E-5
score: 33.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 183..211
e-value: 0.0041
score: 17.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 279..311
score: 13.811
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 180..212
score: 11.942
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 213..245
score: 9.644
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 147..179
score: 14.239
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 246..278
score: 12.876
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 218..310
e-value: 4.5E-18
score: 65.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 113..311
score: 60.005
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 219..403
e-value: 5.8E-34
score: 119.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 111..218
e-value: 4.4E-28
score: 99.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 114..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1278contigL-elsbetiae_contig1278:5066..24108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1278.2229.1mRNA_L-elsbetiae_contig1278.2229.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1278 5066..25438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1278.2229.1 ID=prot_L-elsbetiae_contig1278.2229.1|Name=mRNA_L-elsbetiae_contig1278.2229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=828bp
MSSGAERTLFPAREEATGGIIDQDEGRDLHQHPAAETPAAAAGGASRQDH
VPPTLPSLAAVGAAAAAAAAERAPVPAPPPARAALRGEEAGSGGKGAYAG
RAPRFSPGFDVKSEESEIHHYAQAGDVEEVRRCLLAGLYQVDEVDGLGCT
PVHLAGAMGHTSVVKLLVEHGATVDARDDAQCTTLHAASEGGHPVVVELL
LRLGADIDARNQRQQTPLHYACGYGQVEAAHQLVVRRASVGARDAKGNTP
LHLACGGGETDVVRLLLTHSSPLDALNHRGRQPLHLACRNGHQKVAIELL
EHGADPSARDANGMQARDMVGAGRRIPQGRRLDLVSMLERYQLGDYAMSR
APMSSTRSLHQLWRDRDTHSNISFGSTPQRVEGLRMSSGPGPSSAAAAAA
AAGAAAAAAVSASGTVRGGARFFGSTATFSRRDSSFDGFPSGSFGSGAAA
GEGGGAYPPGGASTMMPRGVAGEGGGEGIGGGGGGGGGGGGGGGGGGGHS
PRWTMGAQVAGRLEELRARELAASLRSKVQENEAMKRYLESVKEEMRVLQ
RKLSRHSSSSPSSSSPPPSSSVASSAAGYPRDVRAASAGSAGLPSAATAK
AAAAATATSVAEPFSIAEMLTRGMYGSDGIGAARRHGGSGGGGGGGGSNS
GGGGGGRGGAGDVLDDSMNSSSSLQAAAVAAVGARAGGSAGTTGPVRGGG
RGVQLRGASAAEAVAEAAATAAVRTGAGAVGEAADGGKGASRLGAAPSHG
SARGQVGSDFLLPVGWFPPPFVEEGATSGGGSCAELPGGGQLGPGGGGGG
LPGSISQLLDAKRAQLQSLLDAPRIRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf