prot_L-elsbetiae_contig1277.2224.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1277.2224.1
Unique Nameprot_L-elsbetiae_contig1277.2224.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: D8LTB2_ECTSI (50S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB2_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 6.050e-109
Identity = 183/245 (74.69%), Postives = 209/245 (85.31%), Query Frame = 0
Query:    1 MRTTTLAVVLCSVGAQAFVGTPVVDTTRACARTR---GSQPLNMAIIDTRKPAKISTRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPEGEDGEEGDAAAA 242
            M+  TLAVVLC+ GA AFVGTPVV   +ACA TR    SQPLNMA+IDT KP K++ RP K+ V+ EV +LLE SSMVFS+PSS I+ANQVVALRK LP+GCTAKVVKN LMRIA   +EFA LA+VT+GENFW+F+EGE+NLAEPIKYVA FAKQFDKD PGWGGSPFK+GVF G++LDGPGV+AISKLP K+ELMQRLA A+NSVPTK+GRSXXXXXXXXXXXXKLAF PE +D  EGDAAAA
Sbjct:    1 MKAPTLAVVLCAAGASAFVGTPVVQP-KACATTRRHSSSQPLNMAVIDTTKPPKLTKRPAKLKVIEEVKSLLESSSMVFSVPSSYISANQVVALRKDLPEGCTAKVVKNKLMRIASDGSEFAQLADVTTGENFWIFIEGEDNLAEPIKYVAEFAKQFDKDTPGWGGSPFKSGVFGGDVLDGPGVVAISKLPTKKELMQRLAIAVNSVPTKLGRSXXXXXXXXXXXXKLAFAPEEDDAPEGDAAAA 244          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A835YRM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.270e-28
Identity = 87/183 (47.54%), Postives = 113/183 (61.75%), Query Frame = 0
Query:   53 STRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEF--AHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKD---APGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPE 230
            STR GK+  +A V   L K++M+F++PSS +  N V  +RK LP G  A+VVKN LMR+A +      A + ++T GEN W FVE  ++L+E I    +F K  +K    AP       K GV  G+ LD  GV AIS LP+K EL +R+A  + +VPTKI   XXXXXXXXXXXXKLA V E
Sbjct:   48 STRAGKLATIASVKEDLAKATMIFAIPSSQLKVNSVTDMRKKLPAGTKARVVKNKLMRLAVEGAPQWEAVVGDMTKGENMWFFVE--DDLSESITVAKDFIKVVNKKDTHAP-------KFGVLEGKALDAAGVEAISNLPSKTELYRRIAVGVKAVPTKIXXXXXXXXXXXXXXXKLALVDE 221          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A5J4Z5L2_PORPP (50S ribosomal protein L10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5L2_PORPP)

HSP 1 Score: 113 bits (282), Expect = 4.340e-27
Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 0
Query:   61 VVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHL---AEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLA 226
            +V+EVSA +++S+MV SLP   +T  QV  L+  +P+G T + VKNT+++ A  DTE++ L   +E+T G N W+F+  EE++   ++ +  F K   K       +    GVF GE  D  G++A+SKLP KQEL Q++A  IN V TK+ R+ XXXXXXXXXX KLA
Sbjct:   46 LVSEVSATMQQSTMVLSLPLEGLTVKQVNELKAAVPEGVTVRCVKNTIVKRAVADTEYSVLESGSELTKGHNLWVFIP-EESVRGTVEGITGFLKTSKKADT----NAINGGVFGGEAYDADGIVALSKLPTKQELYQQIAVGINQVNTKVARAIXXXXXXXXXXVKLA 209          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A7S1E238_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E238_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.790e-25
Identity = 80/181 (44.20%), Postives = 110/181 (60.77%), Query Frame = 0
Query:   51 KISTRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFD-KDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPE 230
            + ST  GK   VA++ +L++ S MVF++P+ SIT +Q   LR+ LP+G TA VVKNTLM  A   T++   AE+  G + W F+E  +++   IK    F K+ D  ++ G  G     GV    L D  GV  I  LP+K EL  ++AG+I +VPTK    XXXXXXXXXXXXKLA +P+
Sbjct:   39 RASTLEGKKEKVAQIQSLIDTSQMVFTVPAGSITVSQSEILRRSLPEGTTAAVVKNTLMERAVSGTDYETAAELLKGPHMWFFIE--DDIGASIKAYNGFIKENDLMESHGIIG-----GVIESTLYDADGVKQIGNLPSKLELYAKIAGSIKAVPTKXXXXXXXXXXXXXXXXKLATMPD 212          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A7S2ZLQ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 4.700e-24
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 0
Query:   64 EVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPEGE 232
            +V   L+KS++ F+LP    T  +V  LR  +P+   A  VKNTL RIA  D+ +    ++T G N W+F E E ++   ++ +  F K+  K+      +    GV    L DG GV A+SKLP+KQ+L Q++A AINSVPTK+GR XXXXXXXXXXX KLA   E E
Sbjct:   90 QVREQLDKSTLAFALPLEGYTVKEVSELRNVIPENSCALAVKNTLFRIAIADSTWDVAGDLTKGSNLWIFTE-EADMKGTVEAIKKFNKEKKKEET----NGISGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTKVGRXXXXXXXXXXXXIKLAKAEEEE 253          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC)

HSP 1 Score: 106 bits (265), Expect = 1.520e-23
Identity = 74/186 (39.78%), Postives = 97/186 (52.15%), Query Frame = 0
Query:   53 STRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPEGEDGEEGD 238
            +T  GK   V+ V  LL+ S MVF++P+S IT  QV  LR+ LP+G TAKVVKN LM  A + TE+  + E+  G N W F+E  E++   +K      K+F KD           G   G   D  GV  ISKLP+K EL+ ++A  I +VPTK+ R             KLA       GEEGD
Sbjct:  163 TTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIE--EDIGGSVKSW----KKFVKDEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTKVARVVKAPGMKVARAIKLA-------GEEGD 335          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A0G4GLP8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLP8_VITBC)

HSP 1 Score: 105 bits (261), Expect = 3.310e-23
Identity = 78/196 (39.80%), Postives = 111/196 (56.63%), Query Frame = 0
Query:   53 STRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGG-SPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPEGEDGEEGDAAAAPEAAA 247
            +T+ GK   + + S LL  ++++F+L  S +  N+ V LR+ LP+G     VKN L+R+A K T+F   A   +G++ ++FV  E+      K V    KQF K  P +   +  K G F   +LD  GV AISKLP K EL+Q++A  IN VPT++  S  XXXXXXX    LA V   + G EG+  AA E +A
Sbjct:   86 TTKEGKQATIDKFSDLLGDTNLLFALEGSKLGPNERVKLRRSLPEGTKIHTVKNRLLRVAAKGTDFEDYANGATGQSLYVFVTHED-----YKGVMEALKQFGKGMPDFREHNVIKGGSFDSTVLDAEGVDAISKLPTKLELIQKIAVLINMVPTRLATSVKXXXXXXXRAINLALVDGKDGGGEGEGTAAEEPSA 276          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: R7Q865_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q865_CHOCR)

HSP 1 Score: 93.2 bits (230), Expect = 2.250e-19
Identity = 72/169 (42.60%), Postives = 96/169 (56.80%), Query Frame = 0
Query:   62 VAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRSXXXXXXXXXXXXKLAFVPE 230
            VA V   LE   M+F+   S ++  QV  LR+ +P       VKNTLMR A +D+E+A   E T G + W FV+  ++    ++    FAK   +D       P   GV+ G+  DG G+ AI+ LP+KQEL+Q++A  I  VPTK    XXXXXXXXXXXXKLA   E
Sbjct:   57 VALVKESLENCQMLFATNLSGLSVAQVYDLRQRVPKTTKCMTVKNTLMRRAIEDSEWASAHEFTVGSSLWFFVQ--DDFKGSVEAFEKFAKDLKRD-------PIIGGVYDGQKCDGEGIKAIAALPSKQELIQKIAVGIRMVPTKXXXXXXXXXXXXXXXXKLAVADE 216          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A7R9UKR4_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKR4_DIALT)

HSP 1 Score: 87.0 bits (214), Expect = 6.210e-17
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 0
Query:   58 KVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCTAKVVKNTLM-RIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDA---PGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGRS 211
            K   V  V A L+ S+++F+  +  +  N++ ALR  +P+  +  +VKN L+ R    D ++ HL  +    N+W FV  EE++   I+ V  F K+  +D    P       + GVF G  LD  G++ +SKLP+K EL+ ++A  IN VPT++ +S
Sbjct:   83 KDATVDSVKARLDASALIFTFRADGVPVNKLRALRNEMPERSSITLVKNRLLKRAVAGDPKWDHLNPLLENSNYWAFVH-EEDIKPSIEAVQKFLKESGRDKAEHPLGDQRGVRGGVFDGATLDVDGIVKVSKLPSKLELITQIAYGINMVPTRLAKS 239          
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Match: A0A1W9PXC8_9DELT (50S ribosomal protein L10 n=1 Tax=Desulfococcus sp. 4484_241 TaxID=1968522 RepID=A0A1W9PXC8_9DELT)

HSP 1 Score: 81.6 bits (200), Expect = 1.650e-15
Identity = 51/154 (33.12%), Postives = 86/154 (55.84%), Query Frame = 0
Query:   58 KVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPD-GCTAKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANFAKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGAINSVPTKIGR 210
            K  +V E+    +K++++       +T +Q+  LR+ L D G   +VVKNTL+R A +DT+   +++   G      V G ++   P K +++FAK+ DK          KAGV  G LLD   ++A++KLP+++EL+ +L   +N VPT + R
Sbjct:    7 KKALVEELHDSFQKAAVMILTDYKGLTVDQINGLRRKLKDAGVEMRVVKNTLLRRAVRDTDMEAVSDYFKGPT--AVVIGYDDPVAPAKILSDFAKENDK-------LEIKAGVMGGGLLDRDRIIALAKLPSREELLAQLLSVLNGVPTSLVR 151          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1277.2224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB2_ECTSI6.050e-10974.6950S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YRM7_9STRA5.270e-2847.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4Z5L2_PORPP4.340e-2744.3850S ribosomal protein L10 n=1 Tax=Porphyridium pur... [more]
A0A7S1E238_9STRA4.790e-2544.20Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2ZLQ0_9RHOD4.700e-2444.38Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
K0STH8_THAOC1.520e-2339.78Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A0G4GLP8_VITBC3.310e-2339.80Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
R7Q865_CHOCR2.250e-1942.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7R9UKR4_DIALT6.210e-1733.54Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
A0A1W9PXC8_9DELT1.650e-1533.1250S ribosomal protein L10 n=1 Tax=Desulfococcus sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 54..152
e-value: 2.8E-16
score: 59.5
IPR001790Ribosomal protein L10PPANTHERPTHR11560FAMILY NOT NAMEDcoord: 47..224
NoneNo IPR availableGENE3D3.30.70.1730coord: 52..187
e-value: 4.9E-27
score: 96.7
NoneNo IPR availablePANTHERPTHR11560:SF839S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 47..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.648
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 54..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1277contigL-elsbetiae_contig1277:12278..17224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1277.2224.1mRNA_L-elsbetiae_contig1277.2224.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1277 12278..18193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1277.2224.1 ID=prot_L-elsbetiae_contig1277.2224.1|Name=mRNA_L-elsbetiae_contig1277.2224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MRTTTLAVVLCSVGAQAFVGTPVVDTTRACARTRGSQPLNMAIIDTRKPA
KISTRPGKVVVVAEVSALLEKSSMVFSLPSSSITANQVVALRKGLPDGCT
AKVVKNTLMRIACKDTEFAHLAEVTSGENFWMFVEGEENLAEPIKYVANF
AKQFDKDAPGWGGSPFKAGVFAGELLDGPGVLAISKLPNKQELMQRLAGA
INSVPTKIGRSINLVPTKVGRAVKLAFVPEGEDGEEGDAAAAPEAAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P