prot_L-elsbetiae_contig1277.2223.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1277.2223.1
Unique Nameprot_L-elsbetiae_contig1277.2223.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length524
Homology
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BLAST of mRNA_L-elsbetiae_contig1277.2223.1 vs. uniprot
Match: D8LTA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA9_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 6.270e-85
Identity = 131/190 (68.95%), Postives = 157/190 (82.63%), Query Frame = 0 
Query:   60 VCKFLRQMFPEGARSGGAELKCMRRAVSLLDTRWKAEIDRKRKATFSSEDKGVVDAVLMGGVYLPSDTFANVVDYLDHGTAIRSTPCSRSWWRMISGLPAASHVDTNLGKGMGWSAVVTQLKNMRASNPLRSVSRLSFGYGLKLGSFAKLARAAGGPLALTHLDLTRCKGVGKIDFAALAKALPSLRGLA 249
            VC FL Q+FP  AR  G EL+CMRR +SLLD+RWKA++DRKRKATF+SEDKG+VDAVLMGG YLPSD+FA VV+YLDHGTA+RSTP S+SWWR ISGLP ASH+DTN+GK + W  +VTQLK ++ASNPLR+V+R++ G   KLGSF  L +  GG + LTHLDLTR  G  K+DFAALAKALP+LRGLA
Sbjct:    3 VCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFASEDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGLPPASHIDTNIGKRLPWGELVTQLKTIKASNPLRAVARVTLGCRTKLGSFHNLGKVVGG-VGLTHLDLTRSWGAKKLDFAALAKALPTLRGLA 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1277.2223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTA9_ECTSI6.270e-8568.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 214..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1277contigL-elsbetiae_contig1277:4790..12000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1277.2223.1mRNA_L-elsbetiae_contig1277.2223.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1277 4779..12081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1277.2223.1 ID=prot_L-elsbetiae_contig1277.2223.1|Name=mRNA_L-elsbetiae_contig1277.2223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=524bp
MPSSKVPKGKGKGKGNAKGKGKGKGKADPVVDNRRTHMMDAQEETRAAAA
AIESGEVARVCKFLRQMFPEGARSGGAELKCMRRAVSLLDTRWKAEIDRK
RKATFSSEDKGVVDAVLMGGVYLPSDTFANVVDYLDHGTAIRSTPCSRSW
WRMISGLPAASHVDTNLGKGMGWSAVVTQLKNMRASNPLRSVSRLSFGYG
LKLGSFAKLARAAGGPLALTHLDLTRCKGVGKIDFAALAKALPSLRGLAV
ECSFYSPENSAYAWLRGLTGFVRSVKLQSLQLRVTEWETTTESAITDSAL
EDLAYGPRSFSSLFMLGLGFFGIDIGDGESEGGGGSARGGDGDPCTLCKL
WLSAPSLYGGPSITGGMAAIGGNMPHLEELVVDRLKVTDDGWRRFAAARA
DAAAAAATASNNGGATGGGGRSCGRGHDRSPLRRIRIRAEDKAAVPSAAT
RDLLGDTVSTGVTLHLDGRRLATVAAVAATGGGQYVDCEGAPIELDDKED
KPAAKTVVLGPGSDLPGGGVAWM*
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