prot_L-elsbetiae_contig1275.2209.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1275.2209.1
Unique Nameprot_L-elsbetiae_contig1275.2209.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length378
Homology
BLAST of mRNA_L-elsbetiae_contig1275.2209.1 vs. uniprot
Match: A0A6H5JXG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG7_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 2.120e-112
Identity = 203/378 (53.70%), Postives = 247/378 (65.34%), Query Frame = 0
Query:    3 PNAASPAAAAVVAFVLLGSLPSTTSFVPAASRGQVPRHCRPRPSPRVS--APPRMSTPPHGRRQRQPPSCFAPTAAIAHQIQNQQHQHHRQRALSHRRVYGGFPITEAAPRRLPALRPLSIGG-DGLDGIDPLEAGPDPDAVLLRGEPEILREQQEEKEYEAELAEAAATLASAKKAPTKKQIAEEAVAAAVAQMNVNEEGGGRADDATMQSLKPKKK--GARVRIDPFMPRGTVGPTEWAEDEKDELEEGCRGVVVVCHSGLPRDKKRADELFKAVKDRFGHLLHTVEWWDDNPNLDEDDREEIATFEVWLEGPTVVHYHERADGRVDLDDEQMEKILKDLECRVEDEVVLGHYVNEDFLFRLPGFRPIQQRIKQFP 375
            P   S A+ AVVAF LLGSL  T+SFVP ASRGQ PR    RP P  S  A P   T P  R+++Q    F P  A +         H R+R  S  R     P     PRR  +L+PL +GG D +D IDPLE GPDPD +LL+GEPE+LR+QQ     EAELA A A   +A K PTK ++AE AV   +A     E  G  AD+  M +L PK+K    +VR+DP MPRG V P EW +     L EG RG++VVCH+GLP+DKKRA E+  AVK+R+GH++HT EWWDD+  L +DDRE+  TFEVWLEGPTVVHYHERADG++DLDDEQ++KIL DLE RV DE +LG Y+NEDF FRLPGF   +QR KQFP
Sbjct:    4 PATTSAASIAVVAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMTMPAPRQRQQRRQIFMPAGASSTLAG-----HQRRRTPSGGREEVSLP----RPRRCRSLQPLGLGGMDEMDDIDPLEGGPDPDEILLQGEPELLRQQQXXXXXEAELAAAEAATVAAGKGPTKAELAEAAVXXXMASKTAGE--GVGADEVAMAALGPKRKKRAEKVRVDPLMPRGGVAPNEWLD--MANLAEGVRGILVVCHTGLPKDKKRATEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTVVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFP 368          
BLAST of mRNA_L-elsbetiae_contig1275.2209.1 vs. uniprot
Match: D7G5D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D7_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.420e-97
Identity = 152/256 (59.38%), Postives = 190/256 (74.22%), Query Frame = 0
Query:  124 DGLDGIDPLEAGPDPDAVLLRGEPEILREQQEEKEYEAELAEAAATLASAKKAPTKKQIAEEAVAAAVAQMNVNEEGGGRADDATMQSLKPKKKGA--RVRIDPFMPRGTVGPTEWAEDEKDELEEGCRGVVVVCHSGLPRDKKRADELFKAVKDRFGHLLHTVEWWDDNPNLDEDDREEIATFEVWLEGPTVVHYHERADGRVDLDDEQMEKILKDLECRVEDEVVLGHYVNEDFLFRLPGFRPIQQRIKQFPEL 377
            D ++ +DPLEAGPDPD +LL+GEPE+LR+QQEE++YE ELA A A   +A KAPTK ++AE             E  GG AD+A M +L PK+K    + RIDP MPRG V P EW +    +L EG RG++VVCH+GLP+DKKRA E+  AVK+R+GH++HT EWWDD+  L +DDRE+  TFEVWLEGPT+VHYHERADG++DLDDEQ++KIL DLE RV DE +LG Y+NEDF FRLPGF   +QR KQFP L
Sbjct:    2 DEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEVELAAAEAATVAAGKAPTKAELAEXXXXXXXXXXXXRE--GGGADEAAMAALGPKRKKRVEKARIDPLMPRGGVAPNEWLD--MADLAEGVRGILVVCHTGLPKDKKRAAEIMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFPVL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1275.2209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXG7_9PHAE2.120e-11253.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D7_ECTSI4.420e-9759.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..377
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.701

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1275contigL-elsbetiae_contig1275:21382..24854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1275.2209.1mRNA_L-elsbetiae_contig1275.2209.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1275 20582..25029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1275.2209.1 ID=prot_L-elsbetiae_contig1275.2209.1|Name=mRNA_L-elsbetiae_contig1275.2209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=378bp
MTPNAASPAAAAVVAFVLLGSLPSTTSFVPAASRGQVPRHCRPRPSPRVS
APPRMSTPPHGRRQRQPPSCFAPTAAIAHQIQNQQHQHHRQRALSHRRVY
GGFPITEAAPRRLPALRPLSIGGDGLDGIDPLEAGPDPDAVLLRGEPEIL
REQQEEKEYEAELAEAAATLASAKKAPTKKQIAEEAVAAAVAQMNVNEEG
GGRADDATMQSLKPKKKGARVRIDPFMPRGTVGPTEWAEDEKDELEEGCR
GVVVVCHSGLPRDKKRADELFKAVKDRFGHLLHTVEWWDDNPNLDEDDRE
EIATFEVWLEGPTVVHYHERADGRVDLDDEQMEKILKDLECRVEDEVVLG
HYVNEDFLFRLPGFRPIQQRIKQFPEL*
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