prot_L-elsbetiae_contig12740.2202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12740.2202.1
Unique Nameprot_L-elsbetiae_contig12740.2202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length188
Homology
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BLAST of mRNA_L-elsbetiae_contig12740.2202.1 vs. uniprot
Match: A0A6H5JLE3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.860e-12
Identity = 70/165 (42.42%), Postives = 89/165 (53.94%), Query Frame = 0 
Query:    1 MVRTTRRKCSNQCHEAPCIALVAAMVAVSTAAGARTAAS------------YNSNA---SNALFAFGAAGGPPASRFGCVGGGNLMARHRVQALSMNLAAAPARSPRAAAAATGTAGDTGATTDRGVAARPSRRXXXXTETSSG---AAQEGVLTVGGTNIGIGI 147
            M R TR +C +Q HE+P  AL+ AM    TA  A  A S            Y+S++   +N+L AFGA    P SRF   GG  + A+HRVQ LSM LAAAP  +P A  AA G  GD+ A +    + R    XX  +    G   AA+ GVL+VGG+NIGI I
Sbjct:   27 MTRGTRHRCVHQSHESPYAALIVAMAMTVTATSAGPAGSCVRGAATCTPPLYSSSSRINTNSLLAFGAVA-KPTSRFVSGGGREVAAKHRVQTLSMKLAAAPVHTPSAPGAALG--GDSTAVSPSHSSVRXXXXXXPTSIGERGGGNAAEGGVLSVGGSNIGIDI 188
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BLAST of mRNA_L-elsbetiae_contig12740.2202.1 vs. uniprot
Match: D8LKG7_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG7_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 6.240e-8
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0 
Query:   46 NALFAFGAAGGPPASRFGCVGGGNLMARHRVQALSMNLAAAPARSPRAAAAATGTAGDTGATTDRGVAARPSRRXXXXT--ETSSGAAQEG-VLTVGGTNIGI 145
            N L AFGA    P SRFG  GG  + A+HRVQ LSM LAAAP R+P A  AA G  GD+ A +    + R    XXX +  E   G+A EG VL+VGGTNIGI
Sbjct:   38 NCLLAFGAVA-KPTSRFGAGGGREVAAKHRVQTLSMKLAAAPVRTPSATGAAIG--GDSTAVSPSHSSVRXXXXXXXTSIGERGGGSAAEGGVLSVGGTNIGI 137
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12740.2202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLE3_9PHAE8.860e-1242.42Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKG7_ECTSI6.240e-852.43Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12740contigL-elsbetiae_contig12740:1834..3165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12740.2202.1mRNA_L-elsbetiae_contig12740.2202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12740 1834..3186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12740.2202.1 ID=prot_L-elsbetiae_contig12740.2202.1|Name=mRNA_L-elsbetiae_contig12740.2202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MVRTTRRKCSNQCHEAPCIALVAAMVAVSTAAGARTAASYNSNASNALFA
FGAAGGPPASRFGCVGGGNLMARHRVQALSMNLAAAPARSPRAAAAATGT
AGDTGATTDRGVAARPSRRRRRRTETSSGAAQEGVLTVGGTNIGIGIDVG
GMDGRSGGGGGGGGIESLQPTISGFVGVATDGIGGAFS
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