prot_L-elsbetiae_contig1274.2200.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1274.2200.1
Unique Nameprot_L-elsbetiae_contig1274.2200.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
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BLAST of mRNA_L-elsbetiae_contig1274.2200.1 vs. uniprot
Match: D8LDB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.700e-49
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 0 
Query:   27 GAAFTFLAVAISVDAGFSNVKVSQFQQAGLDLSFLVSWDTAGS----PSTDSHLIDIWLETRQPDPSTFVETALHKGIENVGTLWIDTGESWAARSSWDSNISGEAAVCVYNASDLFDNACSE 145
            G A   LA A S DA FSNVK+SQFQQAGLDLSFLVSWDTA +    PS+ S LIDIWLETRQ + S+ VET L +G+EN G++W+D G+SWA RSSWD  ISGE  VCVY++ DLFDNACSE
Sbjct:   26 GVAVVALAKAASADASFSNVKISQFQQAGLDLSFLVSWDTANTTSENPSSGSGLIDIWLETRQTEASSMVETVLQQGVENTGSMWMDAGDSWAIRSSWDGTISGEGIVCVYHSDDLFDNACSE 148
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1274.2200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDB3_ECTSI2.700e-4966.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1274contigL-elsbetiae_contig1274:442..1319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1274.2200.1mRNA_L-elsbetiae_contig1274.2200.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1274 441..1319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1274.2200.1 ID=prot_L-elsbetiae_contig1274.2200.1|Name=mRNA_L-elsbetiae_contig1274.2200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
PTPDPRFPGDYTDIYLHQIDTMLRTSGAAFTFLAVAISVDAGFSNVKVSQ
FQQAGLDLSFLVSWDTAGSPSTDSHLIDIWLETRQPDPSTFVETALHKGI
ENVGTLWIDTGESWAARSSWDSNISGEAAVCVYNASDLFDNACSE
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