prot_L-elsbetiae_contig12736.2199.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12736.2199.1
Unique Nameprot_L-elsbetiae_contig12736.2199.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length363
Homology
BLAST of mRNA_L-elsbetiae_contig12736.2199.1 vs. uniprot
Match: A0A6H5JA78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA78_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.900e-23
Identity = 138/240 (57.50%), Postives = 152/240 (63.33%), Query Frame = 0
Query:   71 KRISALVLSPEIQAALARGETLADSDSDDDAPDKKPPKIIRRPAGSDPNDLLSLLPQPSTAASADDILLKNRKKREDAKTAKSEGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGDDLLAGMHAKSAAAAGSDSGARSGPLFTLPSRARPPPEAVATDLTLPGEEVEAVGAVPSAWDDTAAAXXXXXVAAPGYPAPDRRSAGQQ-WGATDGGHPMASPHGGY 309
            K ++ALVLSPEIQAALARG++L DSDSDD+    K PKI+RRPAGSDP+DLLSLLPQPSTAASAD                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   S++G+RSGPLFTLPSRARPPP A   D   P + +E V  V  + + TAA         PG       SAGQQ WG  D GH  ASP GGY
Sbjct:   75 KTVNALVLSPEIQAALARGDSLGDSDSDDEDGVAKKPKIVRRPAGSDPSDLLSLLPQPSTAASADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SETGSRSGPLFTLPSRARPPPAAAPADP--PEQGMEEV--VRPSGEGTAAVPGYLETGTPGL------SAGQQQWGGFDRGHAAASPQGGY 301          
BLAST of mRNA_L-elsbetiae_contig12736.2199.1 vs. uniprot
Match: D8LC39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC39_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.170e-8
Identity = 57/110 (51.82%), Postives = 62/110 (56.36%), Query Frame = 0
Query:  210 MHAKSAAAAG--SDSGARSGPLFTLPSRARPPPEAVATDLTLPGEEVEAVGAVPSAWDDTAAAXXXXXVAAPGYPAPDRRSAGQQ-WGATDGGHPMASPHGGYGEVGAGG 316
            MHAKSAAAA   S++G++SGPLFTLPSRARPPP A   D   P EE       PS  +DTAA         PG       SAGQQ WG  D GH  A P G Y   GAGG
Sbjct:    1 MHAKSAAAAAAASETGSKSGPLFTLPSRARPPPAAAPAD---PPEEGMGELVRPSG-EDTAAVPRHLETGTPGP------SAGQQQWGGFDRGHAAAFPQGSY--AGAGG 98          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12736.2199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA78_9PHAE3.900e-2357.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC39_ECTSI1.170e-851.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12736contigL-elsbetiae_contig12736:3535..4820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12736.2199.1mRNA_L-elsbetiae_contig12736.2199.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12736 3535..4820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12736.2199.1 ID=prot_L-elsbetiae_contig12736.2199.1|Name=mRNA_L-elsbetiae_contig12736.2199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=363bp
HSATIEPPKGKGKARAYPAAVPAQASTAKQQQQQPTEDASKKNRKGRSSC
SSSSKKKKKKKTATKRKKESKRISALVLSPEIQAALARGETLADSDSDDD
APDKKPPKIIRRPAGSDPNDLLSLLPQPSTAASADDILLKNRKKREDAKT
AKSEGTAAAAAAVSTAPASTKAAPAPAPASVGVGGGVGDDDEPDQESDSD
DGGDDLLAGMHAKSAAAAGSDSGARSGPLFTLPSRARPPPEAVATDLTLP
GEEVEAVGAVPSAWDDTAAAAAAAAVAAPGYPAPDRRSAGQQWGATDGGH
PMASPHGGYGEVGAGGGAQYATYGATSGQQQQQQPSYYQPATAQAAAGFG
GAVQHGAGAHEAE
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